PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG028100.23 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 194aa MW: 21542.1 Da PI: 9.4596 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.3 | 2e-06 | 96 | 125 | 10 | 39 |
HHHHHHHHHHHHHHHCTSCCC...TTS-ST CS HLH 10 rrRRdriNsafeeLrellPkaskapskKls 39 +rRR+riN+++ L+ l+P++ k + +K+s TRIDC6AG028100.23 96 KRRRSRINEKMKALQILIPNSNKVGTTKPS 125 8*******************7445555544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MSRFRRHLEG ATGFYKSEMG GSSEPESHGT SDCPRGGGGS SSKCTRAAEV HNLSERVVAR 60 FPVVNHFPLS FTPLFCSSRP IFLADHCLLA CLIGVKRRRS RINEKMKALQ ILIPNSNKVG 120 TTKPSTVPLC FSLSLNSGLL SLVVLVWLQT DKASMLDEAI LIEYLKQLRL QVHVSKCMSQ 180 WLVDVETNLL VHLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 7e-14 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG028100.23 |