PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG028100.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 128aa    MW: 14031.2 Da    PI: 9.1088
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG028100.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.8e-09781191054
                        HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHH..HHHHHH CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAv..eYIksL 54 
                        +rRR+riN+++  L+ l+P++      K +Ka++L +A+  eY+k+L
  TRIDC6AG028100.17  78 KRRRSRINEKMKALQILIPNS-----NKTDKASMLDEAIliEYLKQL 119
                        8*******************7.....5***********544999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MGGSSEPESH GTSDCPRGGG GSSSKCTRAA EVHNLSERVV ARFPVVNHFP LSFTPLFCSS  60
RPIFLADHCL LACLIGVKRR RSRINEKMKA LQILIPNSNK TDKASMLDEA ILIEYLKQLR  120
LQVHEGVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.11e-20bHLH family protein