PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG028100.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 99aa MW: 10938.4 Da PI: 10.0656 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.8 | 4.6e-09 | 50 | 90 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHH..HHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAv..eYIksL 54 rRR+riN+++ L+ l+P++ K +Ka++L +A+ eY+k+L TRIDC6AG028100.10 50 RRRSRINEKMKALQILIPNS-----NKTDKASMLDEAIliEYLKQL 90 89*****************7.....5***********544999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
MSRFRRHLEG ATGFYKSEMG GSSEPESHGT SDCPRGGGGS SSKCTRAAER RRSRINEKMK 60 ALQILIPNSN KTDKASMLDE AILIEYLKQL RLQVHEGVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67110.1 | 2e-20 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG028100.10 |