PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG025910.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 431aa MW: 47541.1 Da PI: 4.7131

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG025910.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.8	1.8e-18	257	368	2	91
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.....................tekerrtraetrtgCkaklkvkke 71 fYneYA +GF ++k+ +++ +++ ++t++C+++gk e+ + k++r++ + tgC+ak+ +++ TRIDC6AG025910.2 257 FYNEYAAICGFAIKKAGNYHAtkPGGKTVSRYTYRCNRSGKVVGEDVLeekkkqrqlkkqektgilppeKAKRKRKNFIQITGCQAKIIATLK 349 **************999984334568999*****9755443344556799*******98888999999*********99 PP FAR1 72 kdgkwevtkleleHnHelap 91 +kw+vt ++leHnH+l+p TRIDC6AG025910.2 350 -GDKWVVTVVDLEHNHTLSP 368 .9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MNFLGSGYMS YTQLLMAANQ EAGIGGSQHS GQQQDSGGRG FCENDTYMIT EWYGRLQGQD 60 EGGQPTGRQQ AGNVDVGAEG FPSWSWDGNT AEGHQGCSYQ PRYREQDSDD GDFDFDEGED 120 DLDDDLDDEV AAGSSHGPSF PEDMSLDGGL GDDSEAAGSS HGPSFTDGMS FDDVSDNGKQ 180 TDAHGKNKNV CDCDDQQEGE PVQQENVEHL SQEDILMFIE SDSVCAAQAQ TCSQEVRSHH 240 VPYMGMVFDS CDAAHAFYNE YAAICGFAIK KAGNYHATKP GGKTVSRYTY RCNRSGKVVG 300 EDVLEEKKKQ RQLKKQEKTG ILPPEKAKRK RKNFIQITGC QAKIIATLKG DKWVVTVVDL 360 EHNHTLSPPN ESKYLRSHKK MTEEEKLFIG TFNSVQMPTR KIMAILSYLR GGDAPYTKKY 420 VSNVRTAINK E

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MNFLGSGYMS YTQLLMAANQ EAGIGGSQHS GQQQDSGGRG FCENDTYMIT EWYGRLQGQD  60
EGGQPTGRQQ AGNVDVGAEG FPSWSWDGNT AEGHQGCSYQ PRYREQDSDD GDFDFDEGED  120
DLDDDLDDEV AAGSSHGPSF PEDMSLDGGL GDDSEAAGSS HGPSFTDGMS FDDVSDNGKQ  180
TDAHGKNKNV CDCDDQQEGE PVQQENVEHL SQEDILMFIE SDSVCAAQAQ TCSQEVRSHH  240
VPYMGMVFDS CDAAHAFYNE YAAICGFAIK KAGNYHATKP GGKTVSRYTY RCNRSGKVVG  300
EDVLEEKKKQ RQLKKQEKTG ILPPEKAKRK RKNFIQITGC QAKIIATLKG DKWVVTVVDL  360
EHNHTLSPPN ESKYLRSHKK MTEEEKLFIG TFNSVQMPTR KIMAILSYLR GGDAPYTKKY  420
VSNVRTAINK E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-15	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG025910.2