PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG024700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 203aa    MW: 20925.6 Da    PI: 7.305
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG024700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-182069255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++GVr ++ +gr++AeIrdp    k++r++lg+f +ae+Aa+a++aa++ l+g
  TRIDC6AG024700.1 20 RFRGVRKRP-WGRYAAEIRDPA---KKARVWLGTFNSAEDAARAYDAAARMLRG 69
                      69*******.**********83...36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
GGAATAVAAA AEAEGDAGAR FRGVRKRPWG RYAAEIRDPA KKARVWLGTF NSAEDAARAY  60
DAAARMLRGP KAKTNFPLSL PHHRQLPPSY SPYPVAAAAA VPTSIAAAAA RPACSSLSST  120
VESFGGPRAR PVLPPRPPPP PILDGDCHSD CGSSASVVDD DCADAAASPS CGLLLPFDLN  180
LPPEFGGVAC NDDDELKLTA LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-21ERF family protein