PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG023850.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 273aa    MW: 28950.8 Da    PI: 10.3913
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG023850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.51e-07109134227
                       -S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                       kt+lC+ +     Ck Gd+C+FaHg+
  TRIDC6AG023850.1 109 KTKLCNKYNTAEGCKWGDKCHFAHGE 134
                       8***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
SSSQKTDVIE HSPRLLLWFQ LPLHPRHPGR LSGRCRNEHP EWPSSSSKNN SSSTGCPFGE  60
GCHFLHYFPG GHQAVAKMSN LGGQAFAQPQ GRMPAGSAVP DGQPTPTVKT KLCNKYNTAE  120
GCKWGDKCHF AHGERELGKH TFINNSMPPR MGTRPIGHFG PPAMPGPAMT TPTGFGASST  180
AKVSVDASLV GGIIGRGGVN TKQISGVTGA KLAIRLEDLT AAAAAVSREA TSRPSCATTS  240
RKDRARLATD ATLPMARTSC ANRLPREVDL PTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.19e-12C3H family protein