PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG019950.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TALE | ||||||||
Protein Properties | Length: 194aa MW: 22116.8 Da PI: 7.1471 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.6 | 8.8e-08 | 143 | 176 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + TRIDC6AG019950.4 143 KWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 176 569*****************************87 PP | |||||||
2 | ELK | 27.7 | 6.3e-10 | 97 | 118 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L+++Y+++L+++++E++ TRIDC6AG019950.4 97 ELKSELKQGYKEKLVDIREEIM 118 9********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
THYVLLLCSF KEQLQQHVRV HAMEAVMGCW ELEQSLQSLT GASPGEGTGA TMSDDEDNQV 60 DSEANMFDGN DGSDGMGFGP LILTEGERSL IERVRHELKS ELKQGYKEKL VDIREEIMRK 120 RRAGKLPGDT AATLKAWWQA HSKWPYPTED DKARLVQETG LQLKQINNWF INQRKRNWHS 180 SNTASSSEKT KKKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 174 | 194 | RKRNWHSSNTASSSEKTKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.2 | 1e-119 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG019950.4 |