PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG019950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 45aa MW: 5371.02 Da PI: 11.4353 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 17.5 | 7.1e-06 | 3 | 27 | 30 | 54 |
HHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 30 reeLAkklgLterqVkvWFqNrRak 54 +++L +++gL+ +q+ +WF N+R + TRIDC6AG019950.1 3 KARLVQETGLQLKQINNWFINQRKR 27 67899******************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 45 aa Download sequence |
DDKARLVQET GLQLKQINNW FINQRKRNWH SSNTASSSEK TKKKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 45 | RKRNWHSSNTASSSEKTKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.2 | 2e-19 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG019950.1 |