PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG017730.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Whirly | ||||||||
Protein Properties | Length: 167aa MW: 18351 Da PI: 9.607 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 144.5 | 4.1e-45 | 55 | 164 | 2 | 111 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkal 94 v+k+kaal++ +++p f++++sg +++r+G+++l++ +a+++rkyd+ kkq fals+tev++l++l++ esceffhdp++k+s+eG+v+k+l TRIDC6AG017730.6 55 VFKGKAALSISPILPLFTKVESGGSRVDRNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSL 147 9******************************************************************************************** PP Whirly 95 kvePlpdGsGlfvnlsv 111 ++ Pl G+fvn++ TRIDC6AG017730.6 148 SITPLGSDNGYFVNITC 164 ******999*****985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
LQWVYNKFFF VLCRGVTDLK DVLWSGSLTF KHALSTSAAN VDENASVKKY ASYTVFKGKA 60 ALSISPILPL FTKVESGGSR VDRNGSVMLT FFPAVGQRKY DYTKKQLFAL SPTEVGSLIS 120 LGPAESCEFF HDPSMKSSHE GQVKKSLSIT PLGSDNGYFV NITCLRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 1e-52 | Whirly family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG017730.6 |