PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG015740.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 292aa    MW: 31309.8 Da    PI: 5.4126
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG015740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.94.5e-16249283133
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 
                       C++Cg ++  Tp++Rrgpdg++tLCnaCGl ++ k
  TRIDC6AG015740.1 249 CQHCGISSnnTPMMRRGPDGPRTLCNACGLAWANK 283
                       *****99889**********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MSGHHDASKP YQPRRGPERP PPQQPAEDEE AAAAAAAMAE VEAAAGAMEQ YEPHLEHGEE  60
EEEEEGEEEG EEEGEEGHGY AYDYVTGEAV PMDEEGAAAA AHAHHGAAGP HGMEAGGAPQ  120
APSNTLTLSF QGEVFVFESV SAEKVQAVLL LLGGRELGPG MGVGPSSSAS YSKRLNSHRM  180
ASLMRFREKR KERNFDKKIR YSVRKEVAHR MQRHKGQFTS SKAKAEEAAA AANSDWGAVE  240
GRPLSAPVCQ HCGISSNNTP MMRRGPDGPR TLCNACGLAW ANKVLKILVV LC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-51GATA family protein