PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6AG014380.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 479aa MW: 51671.6 Da PI: 9.3877

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG014380.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.2	8.7e-42	191	267	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+adls++k+yhr+h+vCe h+kap+v+v+gle+rfCqqCsrfh+l efD++krsCrrrL++hn+rrrk+q+ TRIDC6AG014380.3 191 CQVEGCKADLSTVKDYHRKHRVCELHAKAPKVVVAGLERRFCQQCSRFHALAEFDQKKRSCRRRLNDHNSRRRKPQP 267 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MGSFGMEWNQ RSSVLWDWEN FPPIGENPKN AMQADPRFAA VAATMGNEPL HSSGGSGSGS 60 GSGNFSSSSE MGYGSSKSSM SASIDSSSKA GNNMEFRFAP VKNTDRNMSK NTELGKVDNT 120 RTGTSPSPVV AVSSGEPVIG LKLGKRTYFE DVCGGQSVKS SPSGAASAPN KSPAVGKKAK 180 AEQQKPHNSY CQVEGCKADL STVKDYHRKH RVCELHAKAP KVVVAGLERR FCQQCSRFHA 240 LAEFDQKKRS CRRRLNDHNS RRRKPQPEAI SFSSSRMSTM FYDARQQPNF LFGQAPYVQM 300 RSCGSSSWDD PGGFKVTHTK APWLKPTTAA GVHGMHLSSQ QMSDNIMPHG AHHGFDGFMS 360 FKGTCTKFPN QGVQASAVAS DSSGAPDLQH ALSLLSSNPV GAANLQPSPQ MHSGVAAIAG 420 APNPAMHALG SSVGLWLDGG QPLDDHPRFQ VFERWGDHDS ELQLPKPSYD HASHFDRMH

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MGSFGMEWNQ RSSVLWDWEN FPPIGENPKN AMQADPRFAA VAATMGNEPL HSSGGSGSGS  60
GSGNFSSSSE MGYGSSKSSM SASIDSSSKA GNNMEFRFAP VKNTDRNMSK NTELGKVDNT  120
RTGTSPSPVV AVSSGEPVIG LKLGKRTYFE DVCGGQSVKS SPSGAASAPN KSPAVGKKAK  180
AEQQKPHNSY CQVEGCKADL STVKDYHRKH RVCELHAKAP KVVVAGLERR FCQQCSRFHA  240
LAEFDQKKRS CRRRLNDHNS RRRKPQPEAI SFSSSRMSTM FYDARQQPNF LFGQAPYVQM  300
RSCGSSSWDD PGGFKVTHTK APWLKPTTAA GVHGMHLSSQ QMSDNIMPHG AHHGFDGFMS  360
FKGTCTKFPN QGVQASAVAS DSSGAPDLQH ALSLLSSNPV GAANLQPSPQ MHSGVAAIAG  420
APNPAMHALG SSVGLWLDGG QPLDDHPRFQ VFERWGDHDS ELQLPKPSYD HASHFDRMH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	264	KKRSCRRRLNDHNSRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	4e-43	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG014380.3