PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6AG014100.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 200aa MW: 22627.8 Da PI: 9.6468 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.5 | 5.4e-53 | 18 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l TRIDC6AG014100.4 18 LPPGFRFHPTDEELVVHYLKKKAAKVPLPV-TIIAEVDLYKFDPWELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL 109 79****************************.89***************988899*************************************** PP NAM 94 sk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +e+ g+kk Lvfy+g+ pkg kt+W+mheyrl TRIDC6AG014100.4 110 ASgtgcglVREKLGVKKALVFYRGKPPKGLKTNWIMHEYRL 150 *98777776677***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
RHQHEPPPPR QRGSAPELPP GFRFHPTDEE LVVHYLKKKA AKVPLPVTII AEVDLYKFDP 60 WELPEKATFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPILA SGTGCGLVRE 120 KLGVKKALVF YRGKPPKGLK TNWIMHEYRL TDVSGSTTTS RPPPPLDDWV LCRIYKKINK 180 AAAGDQQRST ECEDSVEDAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61110.1 | 3e-87 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6AG014100.4 |