PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG012780.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 420aa MW: 46251.2 Da PI: 5.3188

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG012780.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	82.1	8.4e-26	1	73	21	101
ES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 21 ws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101 ws ++ +sfvv+++ efa ++Lp yFkhsnf+SF+RQLn+YgF+k++ e+ weF +++F kg+k+ll++i r+k TRIDC6AG012780.3 1 WSdASDTSFVVWNSPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPER---------WEFGNEYFVKGQKHLLKNIYRRK 73 6645679**************************************999.........*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
WSDASDTSFV VWNSPEFAAR LLPAYFKHSN FSSFIRQLNT YGFRKIDPER WEFGNEYFVK 60 GQKHLLKNIY RRKPIHSHSH QPGALPDNER SFFEDEIDRL AREKANLQAE LWKSKQQESG 120 TMFQIEALER RAVDMEQRQG KMIAFLQQAS KNPHFVSKLV KMAEASSMFA DALHKKRRLS 180 GLDYAVEATE TASFCDDHSA TSRQEMGNLL NQHFSDKLKL GLCSAAAESN LVTLSTQSSH 240 EDNGSPHGRH PPVHDGMGTG CLPLVPQIME LSDTGTSICP SKSSFFAPAV NDEGLSPCHL 300 SLTLASCSMD VDRGQASNAD GSTTINEGSD NPPEATATAM GGNPKASVDA GTAEAPTPRE 360 DTWVAAEPAA PVKANDNFWE QFLTERPGDA SSGPRDPSMD KEQTEGGGKD DREVTEQLKL

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

WSDASDTSFV VWNSPEFAAR LLPAYFKHSN FSSFIRQLNT YGFRKIDPER WEFGNEYFVK  60
GQKHLLKNIY RRKPIHSHSH QPGALPDNER SFFEDEIDRL AREKANLQAE LWKSKQQESG  120
TMFQIEALER RAVDMEQRQG KMIAFLQQAS KNPHFVSKLV KMAEASSMFA DALHKKRRLS  180
GLDYAVEATE TASFCDDHSA TSRQEMGNLL NQHFSDKLKL GLCSAAAESN LVTLSTQSSH  240
EDNGSPHGRH PPVHDGMGTG CLPLVPQIME LSDTGTSICP SKSSFFAPAV NDEGLSPCHL  300
SLTLASCSMD VDRGQASNAD GSTTINEGSD NPPEATATAM GGNPKASVDA GTAEAPTPRE  360
DTWVAAEPAA PVKANDNFWE QFLTERPGDA SSGPRDPSMD KEQTEGGGKD DREVTEQLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	5e-93	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG012780.3