PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG005120.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 207aa MW: 24001.3 Da PI: 7.9693 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.2 | 6.8e-06 | 9 | 34 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp Cgk+Fs k n +rH + H TRIDC6AG005120.6 9 FTCPleGCGKRFSIKANIQRHVKEmH 34 89********************9988 PP | |||||||
2 | zf-C2H2 | 17.8 | 9.3e-06 | 53 | 75 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ C+k F+ +s+Lk+H +H TRIDC6AG005120.6 53 CQeeGCKKAFKYPSQLKKHEESH 75 77779**************9988 PP | |||||||
3 | zf-C2H2 | 17.7 | 1e-05 | 142 | 166 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C sFs+ksnL++H++ H TRIDC6AG005120.6 142 KCSfdGCECSFSTKSNLNKHMKAcH 166 799999****************955 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MLTHEGKLFT CPLEGCGKRF SIKANIQRHV KEMHEDEHEC KMDDTKSNQQ VICQEEGCKK 60 AFKYPSQLKK HEESHAKLDY VEVVCCEPGC LKTFTNAKCL RAHNQSCHLY THCDICGEKH 120 LRKNIKRHLR AHDEVHSTER LKCSFDGCEC SFSTKSNLNK HMKACHDQVR PFECRVAGCG 180 KTFPYKHVRD NHEKSSCHVY VEVGDYE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.1 | 2e-74 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG005120.6 |