PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG005120.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 265aa MW: 30535.6 Da PI: 7.8639

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG005120.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.7	9.7e-06	9	34	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp Cgk+Fs k n +rH + H TRIDC6AG005120.2 9 FTCPleGCGKRFSIKANIQRHVKEmH 34 89********************9988 PP
2	zf-C2H2	17.3	1.3e-05	53	75	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ C+k F+ +s+Lk+H +H TRIDC6AG005120.2 53 CQeeGCKKAFKYPSQLKKHEESH 75 77779**************9988 PP
3	zf-C2H2	17.2	1.4e-05	142	166	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ C sFs+ksnL++H++ H TRIDC6AG005120.2 142 KCSfdGCECSFSTKSNLNKHMKAcH 166 799999****************955 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MLTHEGKLFT CPLEGCGKRF SIKANIQRHV KEMHEDEHEC KMDDTKSNQQ VICQEEGCKK 60 AFKYPSQLKK HEESHAKLDY VEVVCCEPGC LKTFTNAKCL RAHNQSCHLY THCDICGEKH 120 LRKNIKRHLR AHDEVHSTER LKCSFDGCEC SFSTKSNLNK HMKACHDQVR PFECRVAGCG 180 KTFPYKHVRD NHEKSSCHVY VEGDYEEMDE QLRSRRGGGR KRSAVTVETL TRKRVTIPSE 240 VSLLDDGAEY MRWMLSDGDG SNHAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.1	6e-83	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG005120.2