PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001260.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 519aa    MW: 55843.8 Da    PI: 6.7931
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001260.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.61.2e-17245301155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgL..tlehvkSHLQkYRl 55 
                       k++l+Wt e+He Fv+av+qL  +   tP +i+e+++++g+  t ++v SHLQkYR+
  TRIDC6AG001260.4 245 KKKLEWTAEMHELFVNAVTQLKTTGDDTPNNIREFLEIDGIyvTTAQVSSHLQKYRS 301
                       689*******************999***************65599***********7 PP
2Myb_DNA-binding21.84.5e-07247300148
                       TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.....TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.....kgRtlkqcksrwqkyl 48 
                       ++ WT+e +el+v+av+ql +    t++ I + +         t  q+ s++qky+
  TRIDC6AG001260.4 247 KLEWTAEMHELFVNAVTQLKTTgddTPNNIREFLEidgiyV--TTAQVSSHLQKYR 300
                       689*****************99**************99875..789********97 PP
3Response_reg40.81.2e-14741811107
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalea 89 
                       vl vdD+p+ ++ l+q+l++ gy ev++  ++ +a++ ++++    D i++ ++  g  mdGl llk++ ++   + ++++++++++e++++ 
  TRIDC6AG001260.4  74 VLAVDDDPIYLHSLTQMLRRCGY-EVTAKLSPADAVREVEKNPnrTDFIMTVVQTRGrgMDGLGLLKRLGKRY--PVVLMFSGEESMETRIRG 163
                       799********************.6665555555665555554489*999999998888**********7766..6999************** PP

                       HHTTESEEEESS--HHHH CS
      Response_reg  90 lkaGakdflsKpfdpeel 107
                        + Ga   l+Kp    ++
  TRIDC6AG001260.4 164 NQGGACYLLEKPLRDTQI 181
                       ************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    
VTAVHASLYS WCCCKVLSLH AGAAVKFCLF VLAVAGHSTL RADEHEFDAH AAAMANGDQD  60
MATDELMETE GLKVLAVDDD PIYLHSLTQM LRRCGYEVTA KLSPADAVRE VEKNPNRTDF  120
IMTVVQTRGR GMDGLGLLKR LGKRYPVVLM FSGEESMETR IRGNQGGACY LLEKPLRDTQ  180
IYFLWQHVVR WRLNAAAAAT ANANPHHSLG VHLDDSQRKR GQGVNDSNKG KGASEGGLQL  240
GTTKKKKLEW TAEMHELFVN AVTQLKTTGD DTPNNIREFL EIDGIYVTTA QVSSHLQKYR  300
SDHRTGGLST MPSSRPSHSN STSKNYSESQ ECEGSYRIHM RSQGARDINQ TSWLSGGASQ  360
VDYGVLGNWN QTTNLGAGAA YGHGYYHGNG IGDINGYDHH YGIVSANDYG QHYGNGNNTS  420
YGYPHGNSSD NNCGNGNGGR GGVITSGSMV SASLLSNLAP PVQHGMRADA SAGQASVVHP  480
QNLDKGFLNW ANTSSETAGT SGGGGVVTDG TTHGLTMEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.13e-21ARR-B family protein