PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG000880.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 262aa MW: 28649.8 Da PI: 9.6734

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG000880.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.1e-32	84	137	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ TRIDC6AG000880.1 84 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 137 9****************************************************7 PP
2	Myb_DNA-binding	49.3	1.1e-15	85	136	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ TRIDC6AG000880.1 85 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 136 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
WTPPPSAATA ASYSNHISNH YHHRMNALLK PIRGVPIYHH HPSFQQLQHQ HMAMAYRSTG 60 VGGGGGFLSS RSRFPPGRRS VRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV 120 KDLTLAHVKS HLQMYRTIKS TDKPMTSPGQ NEGFDNGSAG EISDESLPEA LNTHRGTDQN 180 GTSANSHSSS SYNGGLWSNS SSRVGWPGLG TNSTENRGQC HKEADASKSL EMSAEMNVSC 240 ISDQTSSPPV PNLEFTLGRT HH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-42	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG000880.1