PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG083350.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 311aa    MW: 35795.5 Da    PI: 5.8999
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG083350.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix67.23.4e-2123103286
           trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        W++ e+++Li++++++++rlrrg+lk+++We+v++ +  r +g +++ +qC++k+e+l+kry+ ++++         s +p+f+++e
  TRIDC5BG083350.11  23 WSDGETMHLIDVYEDRWTRLRRGQLKAHQWEDVAADVtrRCGGQRKTGTQCRHKLEKLRKRYRTEAARPVT------SLWPFFRRME 103
                        *************************************877889999******************9998885......68*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
LNRRPPPRGH PMEARKSAPG QPWSDGETMH LIDVYEDRWT RLRRGQLKAH QWEDVAADVT  60
RRCGGQRKTG TQCRHKLEKL RKRYRTEAAR PVTSLWPFFR RMERLERGPV PVSTNSFPAS  120
PPASDDDQDQ DQDHDLDLDL DQEEEEEDEE EEEDGEEDQE EEEEEQLLVA RNRSINGLVR  180
DAGGFRGHQQ QQQRRRPSPP AVTLSTAPPR KRVSYEAAMF QSKAAAADRV KAEEAPAVDH  240
HSVAGVLRDI GEGIKRLERR RMEVQWEIER GWKETEARSN QMLQDAQRQL QDTLAALPPT  300
GKKARRDHGS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.19e-23Trihelix family protein