PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG082200.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 538aa MW: 59133.4 Da PI: 4.889

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG082200.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	105.2	5.3e-33	48	142	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT..TEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY..gFkkvkdeekkskskekiweFkhksFkkgkke 92 Fl+k+y++++d++++ ++sw +nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+Y gF+kv+ ++ weF+++ F +g+k+ TRIDC5BG082200.2 48 FLMKTYDMVDDPATDAVVSWGPANNSFIVWNTPEFARDLLPKYFKHNNFSSFVRQLNTYvrGFRKVDPDK---------WEFANEGFLRGQKH 131 9******************999*******************************9999999.........********** PP XXXXXXXXXXX CS HSF_DNA-bind 93 llekikrkkse 103 ll++i+r+k + TRIDC5BG082200.2 132 LLKTINRRKPS 142 ******975 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
PYGSRTAMDG GVAAVASAAA AAAAASSTVT TAVAPPGAGA GAGAPPPFLM KTYDMVDDPA 60 TDAVVSWGPA NNSFIVWNTP EFARDLLPKY FKHNNFSSFV RQLNTYVRGF RKVDPDKWEF 120 ANEGFLRGQK HLLKTINRRK PSHANNQVQV PQQQQHHQQQ HQQQPQLQNA PMPSCVEVGK 180 FGMEEEIEML KRDKNVLMQE LVRLRQQQQT TDHQLQTLGK RLHGMEQRQQ QMMSFLAKAM 240 QSPGFLAQFV QQNENSKRRI VAANKKRRLP KQDDGLNPES ALLDGQIIKY QPMINEAAKA 300 MLRKILQQDT SPHRFESMGN SDNLLLENCM PSAQTFDSSS STRNSAVTLA EVPGNSGMPY 360 MPTSSGLSAI CSSSTPPEMQ CPVLDSNSST QLPTQLPNMS AASSIPKAMT PGLSDISIPG 420 FPDLHDLITE DAINIPVENF AMPGPECIFP LPDEGSDDSV PMDPIDTDET DDTQKLPGII 480 DSFWEQFLCA SPLSIDNDEV DSGLLDTREA QEENGWTRTE NLANLTEQMG LLSSNHRG

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

PYGSRTAMDG GVAAVASAAA AAAAASSTVT TAVAPPGAGA GAGAPPPFLM KTYDMVDDPA  60
TDAVVSWGPA NNSFIVWNTP EFARDLLPKY FKHNNFSSFV RQLNTYVRGF RKVDPDKWEF  120
ANEGFLRGQK HLLKTINRRK PSHANNQVQV PQQQQHHQQQ HQQQPQLQNA PMPSCVEVGK  180
FGMEEEIEML KRDKNVLMQE LVRLRQQQQT TDHQLQTLGK RLHGMEQRQQ QMMSFLAKAM  240
QSPGFLAQFV QQNENSKRRI VAANKKRRLP KQDDGLNPES ALLDGQIIKY QPMINEAAKA  300
MLRKILQQDT SPHRFESMGN SDNLLLENCM PSAQTFDSSS STRNSAVTLA EVPGNSGMPY  360
MPTSSGLSAI CSSSTPPEMQ CPVLDSNSST QLPTQLPNMS AASSIPKAMT PGLSDISIPG  420
FPDLHDLITE DAINIPVENF AMPGPECIFP LPDEGSDDSV PMDPIDTDET DDTQKLPGII  480
DSFWEQFLCA SPLSIDNDEV DSGLLDTREA QEENGWTRTE NLANLTEQMG LLSSNHRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-117	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG082200.2