PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG081000.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 511aa MW: 58952.7 Da PI: 6.7353

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG081000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	148.6	1.5e-46	21	133	5	117
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 k w k++ +++iL nfe++ +++++++rp+sgs++L+nr++ ++fr+DGy+w+k+ +gk+ +E+he LKv++v++l+cyYa++eenptf rr TRIDC5BG081000.1 21 KVAWFKTRAVLEILRNFEQFPIQHKTPQRPPSGSWFLFNRRVHHFFRNDGYQWHKRTNGKSSNEAHEYLKVDNVKALNCYYARGEENPTFMRR 113 678**************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylev 117 +yw+Le ++++ivlvhy++v TRIDC5BG081000.1 114 IYWMLEPAYDHIVLVHYRDV 133 ***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSTLASSSAD IDIEKLQHLA KVAWFKTRAV LEILRNFEQF PIQHKTPQRP PSGSWFLFNR 60 RVHHFFRNDG YQWHKRTNGK SSNEAHEYLK VDNVKALNCY YARGEENPTF MRRIYWMLEP 120 AYDHIVLVHY RDVLEGTLTA PQHFAIMLGD HETDMQVPNI DCCSETNVQQ FAVMHGDHET 180 DMQIEPTPDH MPLQHLKDIT NNFCNERILG RGGFGVVYKG VLQNGKMVAV KKLVQSMSSS 240 QEQFENEVNL LMKLKHTNIV QLLGYCYETQ HLRKLHEGKF IFAWNTECLL CLECLPKGSL 300 DKYISDASYG FDWPTRLQII EGISYGLQYL HEQSDGPIIH LDLKPANILL DENMIPKITD 360 FGLSRLFDKK QTIHTAVTTG KLGYMPPEYL RGIITPMSDI FSLGVIIMEV ITGHRDYPYD 420 IRTSSKEFIE LELKKWRDVL QIEPGYTSLE IDCQQITRCI QIGLICVNPE RTKRPAMKKV 480 IDMLQGLESM DWYISNELSS RPQHPGGAAV N

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSTLASSSAD IDIEKLQHLA KVAWFKTRAV LEILRNFEQF PIQHKTPQRP PSGSWFLFNR  60
RVHHFFRNDG YQWHKRTNGK SSNEAHEYLK VDNVKALNCY YARGEENPTF MRRIYWMLEP  120
AYDHIVLVHY RDVLEGTLTA PQHFAIMLGD HETDMQVPNI DCCSETNVQQ FAVMHGDHET  180
DMQIEPTPDH MPLQHLKDIT NNFCNERILG RGGFGVVYKG VLQNGKMVAV KKLVQSMSSS  240
QEQFENEVNL LMKLKHTNIV QLLGYCYETQ HLRKLHEGKF IFAWNTECLL CLECLPKGSL  300
DKYISDASYG FDWPTRLQII EGISYGLQYL HEQSDGPIIH LDLKPANILL DENMIPKITD  360
FGLSRLFDKK QTIHTAVTTG KLGYMPPEYL RGIITPMSDI FSLGVIIMEV ITGHRDYPYD  420
IRTSSKEFIE LELKKWRDVL QIEPGYTSLE IDCQQITRCI QIGLICVNPE RTKRPAMKKV  480
IDMLQGLESM DWYISNELSS RPQHPGGAAV N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-41	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG081000.1