PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG077670.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1912aa MW: 215386 Da PI: 6.343

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG077670.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.5	8.9e-52	1083	1199	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r frkDG++w+kkk+g tv+E+he+L g+++vl+cyYah+e+n TRIDC5BG077670.5 1083 KEaQTRWLRPTEICEILKNYRNFHIAPEPPNMPASGSLFLFDRKVLRLFRKDGHNWRKKKNGTTVKEAHERLTSGSIDVLHCYYAHGEDNI 1173 5559************************************************************************************* PP CG-1 93 tfqrrcywlLeeelekivlvhylevk 118 +fqrr+yw+Lee++ +ivlvhylevk TRIDC5BG077670.5 1174 NFQRRSYWMLEEDYMHIVLVHYLEVK 1199 *********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1912 aa Download sequence
MERSQRDTLL EQIRVCYEIA LECRDFSPKK RPASGRDIVD RVREMEGIQA EMGSSLAVMS 60 AMDDALVNSS LADIGAMNAP VSSSLGVMGP LLRKLDSLLL LGCRLRGPLK DRVVLLREDL 120 EEISVALVEQ SMVDSPNEMA KYWMNEVREL CYDIEDFIDD MMLTHADAKM RSVQSFKVGR 180 VKIPWLPKKV RPCTRAAKFA ELRAPVREAI ERHGRYLDGF TSSSRSLFTV YGHIPLMYAE 240 AANYLVGVND ANTKLVKWLT NEKEQQLKMV AITGHSGVGK TALAKQLYRE VEEQFDCRAF 300 VRASRKPDMR RLLGGILSQV QQHRCPTNSY TVQNLIDKLT EHLQNKRYVI VIDDLWETTS 360 WDIVASAFPE GNNCSRIITT TEIEGVALEC CDYQSDNILK MKPLGGEDSG KLLLNLVFGP 420 ERLCPEQLKG ASDIIIAKCA GLPLATICVS GLLATQPDNP KLWLHVQEFL CSNLSTNSTL 480 EETLHETLKL SYNSLPHYLK TCLMYLCLYP EGCTIWKFDL IKQWIAEDFI CAIEGTDTAE 540 VADSYFEELV NRGMIQPVDI NYSGEVLSCT LHHVVLDLIT LESTEERFIT ALDYSQTIRG 600 HYSKVRRLSL HFSNPRYAKK PTGLTLSKVR SIGFFGILKC APTIVGFKHL RVLILEFWGD 660 QWGIMSFDLT RICRFFQLRY LKISCDASVE VELPTQMRML RYLETLIIDA AVSAVPSDII 720 HLPGLLHLSL GDKTDLPDEV GRIRSLRVLH CFNLSSNSED NVLSLGDLLN LQDLNLTYCT 780 EESDDHLKRN LAALASSLGK LVNLKSITLA PGASGTAIYH DVWSSVSSLP FFLQRLELLP 840 PICIFSRLPQ CLGQLRKLCI LTVVVSELLM EDMDILTGLP ALTVFSLYVR QPTLESIIFK 900 KRAFLGLKCF KYTCGVLSLT FQEEAFPNLQ RLELSFNAHR GEQYYDFLSG IGYLLNLKEI 960 AGTIGAAKDA EESDRRVAES AFTDAIRKHP RFPSYNHVKR VDWVHEEYQL RTQAKDSSRE 1020 KYETLEKQHG RKEGDSLHEQ TRILLKETGE ETKQCTNSWS SYFPATESII FDQMKSDMEQ 1080 ILKEAQTRWL RPTEICEILK NYRNFHIAPE PPNMPASGSL FLFDRKVLRL FRKDGHNWRK 1140 KKNGTTVKEA HERLTSGSID VLHCYYAHGE DNINFQRRSY WMLEEDYMHI VLVHYLEVKL 1200 PSGNDGTSTE CLQLPSAIDG TTTEFQLPSA TDSTFATVDS FEQNNKLLGE AINFPVLKTQ 1260 SSNLSDMLKD SFKRSDSFAR WMSKELAEVD DSQVKSSSGL YRNSEDADNI IGASRHDQLD 1320 WFTLDPMVAQ DQLFSITEFF PSWTYAGSKT RVLVTGSFLT SDKVIKLKWS CMFGEVEVPA 1380 DILADGTLRC YSPPHKPGRV PFYVTCSNKL ACSEVREFEY RPSDSQYMDA PSPHGATNKI 1440 YLQARLDELL SLGQDEQDKF QAALSGPKKE LIDLNKKITS LMTDNDPWSE LLKFADDNQL 1500 APDDRQDQFV ESSIKEKLHI WLLHKAGGGG KDPSVLDEEG QGVLHLAAAL GYDWVIRPTI 1560 TAGVSINFRD VHGWTALHWA AFCGRERTVV ALIALGAAPG ALTDPRPDFP SGRTPADLAS 1620 FNGHKGISGF LAEFSLTSHL QTLNLKEAMG SNASEISGLP GIGDVTGRIA SPSAGQGLQA 1680 GLMGDSLGAV RNAAQAAARI FQVFRVQSFQ RKQAVQYEDD NGVISYERAM SLLSYKPSKP 1740 GQFDPMHAAA ARIQNKFRGW KGRKEFLLIR QRIVKIQAHV RGHQVSKHYR KIIWSIGIME 1800 NVILRWRQQG AGLRGFRSTE GATDSSTSSS SVDVIPVKPA EDDYNFLQDG RKQAEERLQR 1860 ALARVKSMVR YPEARDQDQR ILTVVTKMQE SQLVEETLLE ESTEMDEGFF DE

Sequence ? help Back to Top

Protein Sequence Length: 1912 aa Download sequence

MERSQRDTLL EQIRVCYEIA LECRDFSPKK RPASGRDIVD RVREMEGIQA EMGSSLAVMS  60
AMDDALVNSS LADIGAMNAP VSSSLGVMGP LLRKLDSLLL LGCRLRGPLK DRVVLLREDL  120
EEISVALVEQ SMVDSPNEMA KYWMNEVREL CYDIEDFIDD MMLTHADAKM RSVQSFKVGR  180
VKIPWLPKKV RPCTRAAKFA ELRAPVREAI ERHGRYLDGF TSSSRSLFTV YGHIPLMYAE  240
AANYLVGVND ANTKLVKWLT NEKEQQLKMV AITGHSGVGK TALAKQLYRE VEEQFDCRAF  300
VRASRKPDMR RLLGGILSQV QQHRCPTNSY TVQNLIDKLT EHLQNKRYVI VIDDLWETTS  360
WDIVASAFPE GNNCSRIITT TEIEGVALEC CDYQSDNILK MKPLGGEDSG KLLLNLVFGP  420
ERLCPEQLKG ASDIIIAKCA GLPLATICVS GLLATQPDNP KLWLHVQEFL CSNLSTNSTL  480
EETLHETLKL SYNSLPHYLK TCLMYLCLYP EGCTIWKFDL IKQWIAEDFI CAIEGTDTAE  540
VADSYFEELV NRGMIQPVDI NYSGEVLSCT LHHVVLDLIT LESTEERFIT ALDYSQTIRG  600
HYSKVRRLSL HFSNPRYAKK PTGLTLSKVR SIGFFGILKC APTIVGFKHL RVLILEFWGD  660
QWGIMSFDLT RICRFFQLRY LKISCDASVE VELPTQMRML RYLETLIIDA AVSAVPSDII  720
HLPGLLHLSL GDKTDLPDEV GRIRSLRVLH CFNLSSNSED NVLSLGDLLN LQDLNLTYCT  780
EESDDHLKRN LAALASSLGK LVNLKSITLA PGASGTAIYH DVWSSVSSLP FFLQRLELLP  840
PICIFSRLPQ CLGQLRKLCI LTVVVSELLM EDMDILTGLP ALTVFSLYVR QPTLESIIFK  900
KRAFLGLKCF KYTCGVLSLT FQEEAFPNLQ RLELSFNAHR GEQYYDFLSG IGYLLNLKEI  960
AGTIGAAKDA EESDRRVAES AFTDAIRKHP RFPSYNHVKR VDWVHEEYQL RTQAKDSSRE  1020
KYETLEKQHG RKEGDSLHEQ TRILLKETGE ETKQCTNSWS SYFPATESII FDQMKSDMEQ  1080
ILKEAQTRWL RPTEICEILK NYRNFHIAPE PPNMPASGSL FLFDRKVLRL FRKDGHNWRK  1140
KKNGTTVKEA HERLTSGSID VLHCYYAHGE DNINFQRRSY WMLEEDYMHI VLVHYLEVKL  1200
PSGNDGTSTE CLQLPSAIDG TTTEFQLPSA TDSTFATVDS FEQNNKLLGE AINFPVLKTQ  1260
SSNLSDMLKD SFKRSDSFAR WMSKELAEVD DSQVKSSSGL YRNSEDADNI IGASRHDQLD  1320
WFTLDPMVAQ DQLFSITEFF PSWTYAGSKT RVLVTGSFLT SDKVIKLKWS CMFGEVEVPA  1380
DILADGTLRC YSPPHKPGRV PFYVTCSNKL ACSEVREFEY RPSDSQYMDA PSPHGATNKI  1440
YLQARLDELL SLGQDEQDKF QAALSGPKKE LIDLNKKITS LMTDNDPWSE LLKFADDNQL  1500
APDDRQDQFV ESSIKEKLHI WLLHKAGGGG KDPSVLDEEG QGVLHLAAAL GYDWVIRPTI  1560
TAGVSINFRD VHGWTALHWA AFCGRERTVV ALIALGAAPG ALTDPRPDFP SGRTPADLAS  1620
FNGHKGISGF LAEFSLTSHL QTLNLKEAMG SNASEISGLP GIGDVTGRIA SPSAGQGLQA  1680
GLMGDSLGAV RNAAQAAARI FQVFRVQSFQ RKQAVQYEDD NGVISYERAM SLLSYKPSKP  1740
GQFDPMHAAA ARIQNKFRGW KGRKEFLLIR QRIVKIQAHV RGHQVSKHYR KIIWSIGIME  1800
NVILRWRQQG AGLRGFRSTE GATDSSTSSS SVDVIPVKPA EDDYNFLQDG RKQAEERLQR  1860
ALARVKSMVR YPEARDQDQR ILTVVTKMQE SQLVEETLLE ESTEMDEGFF DE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-169	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG077670.5