PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG077330.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 325aa    MW: 35010.6 Da    PI: 6.4351
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG077330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.83.9e-13141187455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h ++Er+RR++iN +f eL +++P +     kK++Ka+iL  Av+++k+ q
  TRIDC5BG077330.1 141 EHVMAERKRRAKINRRFIELSTVIPGL-----KKMDKATILSDAVRCVKEQQ 187
                       699************************.....9**************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MDDSNMFIQW AMETLEQEQD GAAAGDVFPS SLLELDHSEA LQNGTHMAAH RHGATDSWSS  60
GDSGAAVAVE NNGWSSNCCT NYPAASWNFT SAIPHPPSII EEATPSPPAA PGHVVPELAQ  120
RSPPSRKSSG ASTGTVPTVQ EHVMAERKRR AKINRRFIEL STVIPGLKKM DKATILSDAV  180
RCVKEQQEKL KALEGREVRS IDSVVLVKRP CISNYDDVCP SPPPSAGAGG GPPTTRIPLP  240
EIEARISESK VMVRIHCQDG KGVLVTLLAQ VEGLHLTITH TNVVSFPAST LIINLMAKVD  300
EGFTVTAEDI VWKLDSALRR YHSGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-37bHLH family protein