PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG074280.19

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 291aa MW: 33438.7 Da PI: 8.4823

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG074280.19	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.9	4.8e-15	224	280	32	86
--SEEEEEE.TTS-EEEEEE.....EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 32 esktltled.esgrsWevkliy...rkksgr..yvltkGWkeFvkangLkegDfvvFkldg 86 + ++tl++ e+++sWev+ + r lt+GWk F+k+n+Lk+gD+++Fk+++ TRIDC5BG074280.19 224 C--KITLKSvERNKSWEVEGVNyhpGTN--RsyNCLTRGWKAFCKENELKAGDICTFKVIK 280 3..7999998999****944455333..34489*********************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MEKMPIPPEF LQRGYISEED LNRPRPIATF LTSWHIELKK DGPNVFFTGS EWPKFLAYFE 60 IAETDVLLIK YQGCMNFSFE TFPNGNNEHT EEKISSSQQS EQSPAAQCQE EEHVSTRRRT 120 QSSGITPGAQ SQEEEHVSTR TRKQNNGKTP GAQSQEEEHV CSRKRKQSEV KSMLDGPTTS 180 QHRKKALCEL GSTGSQAWLR KEINGLALKR YLHFPARFGF LERCKITLKS VERNKSWEVE 240 GVNYHPGTNR SYNCLTRGWK AFCKENELKA GDICTFKVIK STLWHVVIDR C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	167	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31690.1	3e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG074280.19