PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG073500.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 168aa MW: 18258.6 Da PI: 10.1982 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 108 | 130 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg F + L H+r+H TRIDC5BG073500.2 108 HDCHICGLGFETGQALGGHMRRH 130 56********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MGAGMRRARE EEVLSLALSL STDSTSSSTT SADSASAPVR KRARRGRVVA TSGEGEFVCK 60 TCGRAFASFQ VLGGHRTRHL RGRHGLELGV GVARAIKERK RQEDKQQHDC HICGLGFETG 120 QALGGHMRRH REEMALSGAI DRWVTLSDQE AGHQAAADRP PVLLELFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46080.1 | 8e-12 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG073500.2 |