PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG072170.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 308aa MW: 34507 Da PI: 7.6898 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.4 | 2.4e-52 | 17 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv +yL++k++g++l++ +i+evd+y+++Pw Lp ++ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v TRIDC5BG072170.5 17 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 108 79****************************.88***************77778999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl TRIDC5BG072170.5 109 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 143 *********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MPAVRRRERD AEAELNLPPG FRFHPTDDEL VEHYLCRKAA GQRLPVPIIA EVDLYRFDPW 60 ALPDRALFGT REWYFFTPRD RKYPNGSRPN RAAGNGYWKA TGADKPVAPR GGRTMGIKKA 120 LVFYAGKAPK GVKTDWIMHE YRLADAGRAA ASKKGSLRLD DWVLCRLYNK KNEWEKMQLQ 180 QQGGEEMMSH SQSQSHSHSW GEARTPESEI VDNDPSLFQQ AAAFQAQSPA AAAAHQEMMA 240 TLMVPKKEAA EEAGRNDLFV DLSYDDIQSM YNGLDMMPPG DDLLYSSLFA SPRLRGSQPG 300 AGGMPAPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 2e-86 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG072170.5 |