PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG072170.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 377aa MW: 41588.9 Da PI: 7.1279

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG072170.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.8	3.7e-52	69	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv +yL++k++g++l++ +i+evd+y+++Pw Lp ++ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v TRIDC5BG072170.2 69 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 160 79**************************.88***********77778999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl TRIDC5BG072170.2 161 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 195 *******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
PLPHPLPYLS PPPFTTTITT PHHSSLTTIS TAIGINSSSG AISSTNKSAD MGMPAVRRRE 60 RDAEAELNLP PGFRFHPTDD ELVEHYLCRK AAGQRLPVPI IAEVDLYRFD PWALPDRALF 120 GTREWYFFTP RDRKYPNGSR PNRAAGNGYW KATGADKPVA PRGGRTMGIK KALVFYAGKA 180 PKGVKTDWIM HEYRLADAGR AAASKKGSLR LDDWVLCRLY NKKNEWEKMQ LQQQGGEEMM 240 VEPKAENTAS DMVVTSHSHS QSQSHSHSWG EARTPESEIV DNDPSLFQQA AAFQAQSPAA 300 AAAHQEMMAT LMVPKKEAAE EAGRNDLFVD LSYDDIQSMY NGLDMMPPGD DLLYSSLFAS 360 PRLRGSQPGA GGMPAPF

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

PLPHPLPYLS PPPFTTTITT PHHSSLTTIS TAIGINSSSG AISSTNKSAD MGMPAVRRRE  60
RDAEAELNLP PGFRFHPTDD ELVEHYLCRK AAGQRLPVPI IAEVDLYRFD PWALPDRALF  120
GTREWYFFTP RDRKYPNGSR PNRAAGNGYW KATGADKPVA PRGGRTMGIK KALVFYAGKA  180
PKGVKTDWIM HEYRLADAGR AAASKKGSLR LDDWVLCRLY NKKNEWEKMQ LQQQGGEEMM  240
VEPKAENTAS DMVVTSHSHS QSQSHSHSWG EARTPESEIV DNDPSLFQQA AAFQAQSPAA  300
AAAHQEMMAT LMVPKKEAAE EAGRNDLFVD LSYDDIQSMY NGLDMMPPGD DLLYSSLFAS  360
PRLRGSQPGA GGMPAPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	2e-85	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG072170.2