PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG067930.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 280aa    MW: 29981.9 Da    PI: 6.367
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG067930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.7e-08130174554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri +++  L+el+P+       K + a +L +  +Y+k L
  TRIDC5BG067930.1 130 HSIAERLRRERIAERMRALQELVPNT-----NKTDRAVMLDEILDYVKFL 174
                       99***********************7.....59**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MAGQPPQGPE DDFLDQFFSL TNSLSAAGRP SGDQPFSLAL SLDAASDASG SRGGIGDDAG  60
NPERDGVQLP GLFPPVFGGG LQPPHLRPSH PPPQMFHAQQ PKQGGPAGGP QPPAPRPKVR  120
ARRGQATDPH SIAERLRRER IAERMRALQE LVPNTNKTDR AVMLDEILDY VKFLRLQVKV  180
LSMSRLGGAG AVAQLVSDIP LSVKGEASDG GSKQQIWEKW STDGTEKQVA KLMDEDIGAA  240
MQFLQSKALC MMPVSLAMAI YDTQHSQDGQ PVKPEPNNTA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135140RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-63bHLH family protein