PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG064860.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 352aa MW: 37491 Da PI: 6.901

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG064860.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.1	6.5e-18	171	217	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq TRIDC5BG064860.3 171 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 217 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
AAWFRDDVDV LGNDVYAQLW NSIAVGAAPD VACAALPGPS SHPPPPPPPM RSRIASSWTG 60 GDIGSTFCGS NLVPEVPAGG REEASAAPPS EGTRGASTRD GGAGTSSSGG SGSNFGGSGL 120 PSESGGHAHK RKGRGKDDYD SRSEDVECEA TEETKSSRRH GSKRRSRAAE VHNQSERRRR 180 DRINEKMRSL QELIPHCNKA DKASILDEAI EYLKSLQMQV QIMWMTTGMA PMMFPGAHQF 240 MPPMAVGMNS ACMPAAQGLN QMARMPYMNH SLSNHIPMNP SPAMNPMYIA NQMQNIQLRE 300 ASNHFLHPDS GLVAGPYAYT PQVAPKSQIP EVPDCTVAPI SGPGQPPAPD GI

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

AAWFRDDVDV LGNDVYAQLW NSIAVGAAPD VACAALPGPS SHPPPPPPPM RSRIASSWTG  60
GDIGSTFCGS NLVPEVPAGG REEASAAPPS EGTRGASTRD GGAGTSSSGG SGSNFGGSGL  120
PSESGGHAHK RKGRGKDDYD SRSEDVECEA TEETKSSRRH GSKRRSRAAE VHNQSERRRR  180
DRINEKMRSL QELIPHCNKA DKASILDEAI EYLKSLQMQV QIMWMTTGMA PMMFPGAHQF  240
MPPMAVGMNS ACMPAAQGLN QMARMPYMNH SLSNHIPMNP SPAMNPMYIA NQMQNIQLRE  300
ASNHFLHPDS GLVAGPYAYT PQVAPKSQIP EVPDCTVAPI SGPGQPPAPD GI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	180	KRRSRAAEVHNQSERRRR
2	176	181	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-31	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG064860.3