PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG064860.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 376aa MW: 39912.6 Da PI: 7.2128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG064860.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56	7.2e-18	224	270	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq TRIDC5BG064860.2 224 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 270 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MDGNGRSAAS HKKPLVADND LVELLWHNGA VVAQPQTHPR PAPSGLAGGG GETAAWFRDD 60 VDVLGNDVYA QLWNSIAVGA APDVACAALP GPSSHPPPPP PPMRSRIASS WTGGDIGSTF 120 CGSNLVPEVP AGGREEASAA PPSEGTRGAS TRDGGAGTSS SGGSGSNFGG SGLPSESGGH 180 AHKRKGRGKD DYDSRSEDVE CEATEETKSS RRHGSKRRSR AAEVHNQSER RRRDRINEKM 240 RSLQELIPHC NKADKASILD EAIEYLKSLQ MQVQIMWMTT GMAPMMFPGA HQFMPPMAVG 300 MNSACMPAAQ GLNQMARMPY MNHSLSNHIP MNPSPAMNPM YIANQMQNIQ LREASNHFLH 360 PDSGLAVAPQ VAGPYA

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MDGNGRSAAS HKKPLVADND LVELLWHNGA VVAQPQTHPR PAPSGLAGGG GETAAWFRDD  60
VDVLGNDVYA QLWNSIAVGA APDVACAALP GPSSHPPPPP PPMRSRIASS WTGGDIGSTF  120
CGSNLVPEVP AGGREEASAA PPSEGTRGAS TRDGGAGTSS SGGSGSNFGG SGLPSESGGH  180
AHKRKGRGKD DYDSRSEDVE CEATEETKSS RRHGSKRRSR AAEVHNQSER RRRDRINEKM  240
RSLQELIPHC NKADKASILD EAIEYLKSLQ MQVQIMWMTT GMAPMMFPGA HQFMPPMAVG  300
MNSACMPAAQ GLNQMARMPY MNHSLSNHIP MNPSPAMNPM YIANQMQNIQ LREASNHFLH  360
PDSGLAVAPQ VAGPYA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	233	KRRSRAAEVHNQSERRRR
2	229	234	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-31	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG064860.2