PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.29
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 416aa    MW: 46036.5 Da    PI: 6.0477
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.29genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.21.3e-123464151373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.29  46 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 134
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.29 135 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 225
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.29 226 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 317
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.29 318 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 408
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.29 409 LVVSSAW 415
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
VVVASDSFGD QLAVGHGQPD ASMTQTNILN DLFSTTDSLG INTGDLKQVI IACGKAAAGN  60
GIYETEVLIS ELRQLVSISG DPMQRLGAYM LQGLVARLSS SGSKLYKSLK CKEPTNSELM  120
SYMHHLCEMC PSYKFGYMSA NGAIAEAIKG QNFVHIIDFQ IAQGSQWITI IQALAARPRG  180
PPCLRITAID DSNSAYARGG GLDMVGTRLH SVSASCGMPF EFNAVHAVSH EVYLEHLDIR  240
PGEVIVVNFA YELHHSPDES LSVENHRDRI IRMIKSLSPM VVTLVEQESN TNTTQFFPRY  300
METLDYYTAM FESIDVALPR DAKIRVNTEQ HCLGRDIISL IACEGAERVE RHEVFGTWKA  360
RFAMAGFRPY PLSSVVNNTI KTLLDGYDSC YRLEERDGVL YLGWKNRVLV VSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-175GRAS family protein