PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.28
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 526aa    MW: 58202.9 Da    PI: 5.0174
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.28genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4032.9e-1231565251373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.28 156 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 244
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.28 245 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 335
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.28 336 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 427
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.28 428 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 518
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.28 519 LVVSSAW 525
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MITRAILTDE QSDNFSTIDS LGNCLTGHGQ HDASVMQANI LNDQGSLLAQ PTPFHNFLPV  60
PADEMITRAS LTDEQTEYFS TTDSLGNFLT GHGQPDASMT QTNILNDLVS LSAQPTPLHN  120
FLSVPADEMI PRASLTDEQT EYFSTTDSLG INTGDLKQVI IACGKAAAGN GIYETEVLIS  180
ELRQLVSISG DPMQRLGAYM LQGLVARLSS SGSKLYKSLK CKEPTNSELM SYMHHLCEMC  240
PSYKFGYMSA NGAIAEAIKG QNFVHIIDFQ IAQGSQWITI IQALAARPRG PPCLRITAID  300
DSNSAYARGG GLDMVGTRLH SVSASCGMPF EFNAVHAVSH EVYLEHLDIR PGEVIVVNFA  360
YELHHSPDES LSVENHRDRI IRMIKSLSPM VVTLVEQESN TNTTQFFPRY METLDYYTAM  420
FESIDVALPR DAKIRVNTEQ HCLGRDIISL IACEGAERVE RHEVFGTWKA RFAMAGFRPY  480
PLSSVVNNTI KTLLDGYDSC YRLEERDGVL YLGWKNRVLV VSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-174GRAS family protein