PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG064000.27 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 465aa MW: 51502.9 Da PI: 5.8468 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 403.6 | 2e-123 | 95 | 464 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 l++++++c +a + + +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e + se +++++ + e++P +k TRIDC5BG064000.27 95 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 183 57899****************************************************************9...8999999999********* PP GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182 f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s + l +g rL+++ +++g+pfefn+ v TRIDC5BG064000.27 184 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 274 *********************************************************988899999************************.6 PP GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274 + +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ TRIDC5BG064000.27 275 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 366 77889999************************************************************************************ PP GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366 lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll ++s yr+ee++g l+lgWk+r TRIDC5BG064000.27 367 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 457 ***********************************************************************55.****************** PP GRAS 367 LvsvSaW 373 Lv+ SaW TRIDC5BG064000.27 458 LVVSSAW 464 ******* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence |
MFHCKIIIIT TIIVVVVVAS DSFGDQLAVG HGQPDASMTQ TNILNDLVSL SAQPTPLHNF 60 LSVPADEMIP RASLTDEQTE YFSTTDSLGI NTGDLKQVII ACGKAAAGNG IYETEVLISE 120 LRQLVSISGD PMQRLGAYML QGLVARLSSS GSKLYKSLKC KEPTNSELMS YMHHLCEMCP 180 SYKFGYMSAN GAIAEAIKGQ NFVHIIDFQI AQGSQWITII QALAARPRGP PCLRITAIDD 240 SNSAYARGGG LDMVGTRLHS VSASCGMPFE FNAVHAVSHE VYLEHLDIRP GEVIVVNFAY 300 ELHHSPDESL SVENHRDRII RMIKSLSPMV VTLVEQESNT NTTQFFPRYM ETLDYYTAMF 360 ESIDVALPRD AKIRVNTEQH CLGRDIISLI ACEGAERVER HEVFGTWKAR FAMAGFRPYP 420 LSSVVNNTIK TLLDGYDSCY RLEERDGVLY LGWKNRVLVV SSAWC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 1e-175 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG064000.27 |