PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.24
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 667aa    MW: 74448.2 Da    PI: 6.0461
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.24genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4025.8e-1232976661373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.24 297 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 385
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.24 386 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 476
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.24 477 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 568
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.24 569 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 659
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.24 660 LVVSSAW 666
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 667 aa     Download sequence    
SHEFINVEDR HKRPTVQNIV DRLNETETEC TCVYKKFEVQ ENSGGLTPNY FMNNGRSVSE  60
VPLNNDAGPS IQARTAWQYP TDMTAQQELG ERQAASLPNG IYEPPRQIMV GFPESGGTTT  120
VERQDLAVKV QEAITDPFVV KDHRSALNGK RYPPSKEEAV HRLENISLKG KHCNDLADKN  180
ITTVKRLMRH YHRDKSGLQK VPADEMITRA ILTDEQSDNF STIDSLGNCL TGHGQHDASV  240
MQANILNDQG SLLAQPTPFH NFLPVPADEM IPRASLTDEQ TEYFSTTDSL GINTGDLKQV  300
IIACGKAAAG NGIYETEVLI SELRQLVSIS GDPMQRLGAY MLQGLVARLS SSGSKLYKSL  360
KCKEPTNSEL MSYMHHLCEM CPSYKFGYMS ANGAIAEAIK GQNFVHIIDF QIAQGSQWIT  420
IIQALAARPR GPPCLRITAI DDSNSAYARG GGLDMVGTRL HSVSASCGMP FEFNAVHAVS  480
HEVYLEHLDI RPGEVIVVNF AYELHHSPDE SLSVENHRDR IIRMIKSLSP MVVTLVEQES  540
NTNTTQFFPR YMETLDYYTA MFESIDVALP RDAKIRVNTE QHCLGRDIIS LIACEGAERV  600
ERHEVFGTWK ARFAMAGFRP YPLSSVVNNT IKTLLDGYDS CYRLEERDGV LYLGWKNRVL  660
VVSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-171GRAS family protein