PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.23
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 780aa    MW: 86878.1 Da    PI: 5.8314
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.23genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS401.58.7e-1234107791373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.23 410 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 498
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.23 499 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 589
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.23 590 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 681
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.23 682 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 772
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.23 773 LVVSSAW 779
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MAGRAGYYKS AEMSSHEFIN VVQENWTNRP HETSSLMKAY SKQVKICIEI GLSCVQEDRH  60
KRPTVQNIVD RLNETETECT CVYKKFEVQE NSGGLTPNYF MNNGRSVSEV PLNNDAGPSI  120
QARTAWQYPT DMTAQQELGE RQAASLPNGI YEPPRQIMVG FPESGGTTTV ERQDLAVKVQ  180
EAITDPFVVK DHRSALNGKR YPPSKEEAVH RLENISLKGK HCNDLADKNI TTVKRLMRHY  240
HRDKSGLQKV PADEMITRAI LTDEQSDNFS TIDSLGNCLT GHGQHDASVM QANILNDQGS  300
LLAQPTPFHN FLPVPADEMI TRASLTDEQT EYFSTTDSLG NFLTGHGQPD ASMTQTNILN  360
DLVSLSAQPT PLHNFLSVPA DEMIPRASLT DEQTEYFSTT DSLGINTGDL KQVIIACGKA  420
AAGNGIYETE VLISELRQLV SISGDPMQRL GAYMLQGLVA RLSSSGSKLY KSLKCKEPTN  480
SELMSYMHHL CEMCPSYKFG YMSANGAIAE AIKGQNFVHI IDFQIAQGSQ WITIIQALAA  540
RPRGPPCLRI TAIDDSNSAY ARGGGLDMVG TRLHSVSASC GMPFEFNAVH AVSHEVYLEH  600
LDIRPGEVIV VNFAYELHHS PDESLSVENH RDRIIRMIKS LSPMVVTLVE QESNTNTTQF  660
FPRYMETLDY YTAMFESIDV ALPRDAKIRV NTEQHCLGRD IISLIACEGA ERVERHEVFG  720
TWKARFAMAG FRPYPLSSVV NNTIKTLLDG YDSCYRLEER DGVLYLGWKN RVLVVSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-170GRAS family protein