PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.21
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 925aa    MW: 103682 Da    PI: 5.9807
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.21genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS400.91.3e-1225559241373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.21 555 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 643
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.21 644 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 734
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.21 735 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 826
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.21 827 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 917
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.21 918 LVVSSAW 924
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 925 aa     Download sequence    
KIYDMPGVDE EQFQNEFKNL ARLQHRNIVR LVGYCHHIEE VPAMYEGKLV LAEKIHRALC  60
LEYMSNGSLE KYISDECDKY DWHTGYGIIK GICQGLKYLH TKLEPPIYHL DLKPANILLD  120
ENMVPRIADF GISRLFGDER TRATKSTLGT QGYLPPEYIR NYLISSKFDI FSLGVVIIKI  180
MAGRAGYYKS AEMSSHEFIN VEDRHKRPTV QNIVDRLNET ETECTCVYKK FEVQENSGGL  240
TPNYFMNNGR SVSEVPLNND AGPSIQARTA WQYPTDMTAQ QELGERQAAS LPNGIYEPPR  300
QIMVGFPESG GTTTVERQDL AVKVQEAITD PFVVKDHRSA LNGKRYPPSK EEAVHRLENI  360
SLKGKHCNDL ADKNITTVKR LMRHYHRDKS GLQKVPADEM ITRAILTDEQ SDNFSTIDSL  420
GNCLTGHGQH DASVMQANIL NDQGSLLAQP TPFHNFLPVP ADEMITRASL TDEQTEYFST  480
TDSLGNFLTG HGQPDASMTQ TNILNDLVSL SAQPTPLHNF LSVPADEMIP RASLTDEQTE  540
YFSTTDSLGI NTGDLKQVII ACGKAAAGNG IYETEVLISE LRQLVSISGD PMQRLGAYML  600
QGLVARLSSS GSKLYKSLKC KEPTNSELMS YMHHLCEMCP SYKFGYMSAN GAIAEAIKGQ  660
NFVHIIDFQI AQGSQWITII QALAARPRGP PCLRITAIDD SNSAYARGGG LDMVGTRLHS  720
VSASCGMPFE FNAVHAVSHE VYLEHLDIRP GEVIVVNFAY ELHHSPDESL SVENHRDRII  780
RMIKSLSPMV VTLVEQESNT NTTQFFPRYM ETLDYYTAMF ESIDVALPRD AKIRVNTEQH  840
CLGRDIISLI ACEGAERVER HEVFGTWKAR FAMAGFRPYP LSSVVNNTIK TLLDGYDSCY  900
RLEERDGVLY LGWKNRVLVV SSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-168GRAS family protein