PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 956aa    MW: 107166 Da    PI: 6.0875
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS400.81.4e-1225869551373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.17 586 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 674
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.17 675 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 765
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.17 766 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 857
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.17 858 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 948
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.17 949 LVVSSAW 955
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 956 aa     Download sequence    
MPGVDEEQFQ NEFKNLARLQ HRNIVRLVGY CHHIEEVPAM YEGKLVLAEK IHRALCLEYM  60
SNGSLEKYIS DECDKYDWHT GYGIIKGICQ GLKYLHTKLE PPIYHLDLKP ANILLDENMV  120
PRIADFGISR LFGDERTRAT KSTLGTQGYL PPEYIRNYLI SSKFDIFSLG VVIIKIMAGR  180
AGYYKSAEMS SHEFINVVQE NWTNRPHETS SLMKAYSKQV KICIEIGLSC VQEDRHKRPT  240
VQNIVDRLNE TETECTCVYK KFEVQENSGG LTPNYFMNNG RSVSEVPLNN DAGPSIQART  300
AWQYPTDMTA QQELGERQAA SLPNGIYEPP RQIMVGFPES GGTTTVERQD LAVKVQEAIT  360
DPFVVKDHRS ALNGKRYPPS KEEAVHRLEN ISLKGKHCND LADKNITTVK RLMRHYHRDK  420
SGLQKVPADE MITRAILTDE QSDNFSTIDS LGNCLTGHGQ HDASVMQANI LNDQGSLLAQ  480
PTPFHNFLPV PADEMITRAS LTDEQTEYFS TTDSLGNFLT GHGQPDASMT QTNILNDLVS  540
LSAQPTPLHN FLSVPADEMI PRASLTDEQT EYFSTTDSLG INTGDLKQVI IACGKAAAGN  600
GIYETEVLIS ELRQLVSISG DPMQRLGAYM LQGLVARLSS SGSKLYKSLK CKEPTNSELM  660
SYMHHLCEMC PSYKFGYMSA NGAIAEAIKG QNFVHIIDFQ IAQGSQWITI IQALAARPRG  720
PPCLRITAID DSNSAYARGG GLDMVGTRLH SVSASCGMPF EFNAVHAVSH EVYLEHLDIR  780
PGEVIVVNFA YELHHSPDES LSVENHRDRI IRMIKSLSPM VVTLVEQESN TNTTQFFPRY  840
METLDYYTAM FESIDVALPR DAKIRVNTEQ HCLGRDIISL IACEGAERVE RHEVFGTWKA  900
RFAMAGFRPY PLSSVVNNTI KTLLDGYDSC YRLEERDGVL YLGWKNRVLV VSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-168GRAS family protein