PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG064000.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 606aa    MW: 67428.6 Da    PI: 6.1763
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG064000.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS402.44.5e-1232366051373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++++++c +a + +   +++ l+++l++l+s +gdpmqRl ay++++L arl++s+s+lyk+l+++e +    se +++++ + e++P +k
  TRIDC5BG064000.16 236 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGAYMLQGLVARLSSSGSKLYKSLKCKEPT---NSELMSYMHHLCEMCPSYK 324
                        57899****************************************************************9...8999999999********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++g++ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiT++++++s   +   l  +g rL+++ +++g+pfefn+ v
  TRIDC5BG064000.16 325 FGYMSANGAIAEAIKGQNFVHIIDFQIAQGSQWITIIQALAARPRGPPCLRITAIDDSNSAyaRGGGLDMVGTRLHSVSASCGMPFEFNA-V 415
                        *********************************************************988899999************************.6 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +   +++ le+L+++pgE+++Vn++++lh+ +des+s+e++rd++++++kslsP vv++veqe+++n+++F+ r +e+l+yy+a+f+s+++ 
  TRIDC5BG064000.16 416 HAVSHEVYLEHLDIRPGEVIVVNFAYELHHSPDESLSVENHRDRIIRMIKSLSPMVVTLVEQESNTNTTQFFPRYMETLDYYTAMFESIDVA 507
                        77889999************************************************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++ r++ E+++lgr+i +++acegaer+erhe +++W++r+ +aGF+p+pls+ +++++k+ll  ++s  yr+ee++g l+lgWk+r 
  TRIDC5BG064000.16 508 LPRDAKIRVNTEQHCLGRDIISLIACEGAERVERHEVFGTWKARFAMAGFRPYPLSSVVNNTIKTLLDGYDSC-YRLEERDGVLYLGWKNRV 598
                        ***********************************************************************55.****************** PP

               GRAS 367 LvsvSaW 373
                        Lv+ SaW
  TRIDC5BG064000.16 599 LVVSSAW 605
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
TMMQDAGPSI QARTAWQYPT DMTAQQELGE RQAASLPNGI YEPPRQIMVG FPESGGTTTV  60
ERQDLAVKVQ EAITDPFVVK DHRSALNGKR YPPSKEEAVH RLENISLKGK HCNDLADKNI  120
TTVKRLMRHY HRDKSGLQKV PADEMITRAI LTDEQSDNFS TIDSLGNCLT GHGQHDASVM  180
QANILNDQGS LLAQPTPFHN FLPVPADEMI PRASLTDEQT EYFSTTDSLG INTGDLKQVI  240
IACGKAAAGN GIYETEVLIS ELRQLVSISG DPMQRLGAYM LQGLVARLSS SGSKLYKSLK  300
CKEPTNSELM SYMHHLCEMC PSYKFGYMSA NGAIAEAIKG QNFVHIIDFQ IAQGSQWITI  360
IQALAARPRG PPCLRITAID DSNSAYARGG GLDMVGTRLH SVSASCGMPF EFNAVHAVSH  420
EVYLEHLDIR PGEVIVVNFA YELHHSPDES LSVENHRDRI IRMIKSLSPM VVTLVEQESN  480
TNTTQFFPRY METLDYYTAM FESIDVALPR DAKIRVNTEQ HCLGRDIISL IACEGAERVE  540
RHEVFGTWKA RFAMAGFRPY PLSSVVNNTI KTLLDGYDSC YRLEERDGVL YLGWKNRVLV  600
VSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-172GRAS family protein