PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 884aa MW: 101508 Da PI: 6.7896

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.4	2.8e-24	111	197	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.9 111 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 197 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 884 aa Download sequence
MRERRYLISI SRSDRADLPQ ADPPRLSHAK LWRKGVREVM EVDFWQATDR WPLERRSKRL 60 EKQNLQNEKK PESKEYEIVE AEQDPETEVV AGPGGEPKVG MVFLNEDKAY EFYVSYAGTA 120 GFNVRKGCSE KTANNVTKSR AYVCSKEGFR PKSFTAEPKK QRAETRTGCE AHMTVKITTS 180 GKYVVTECVA DHNHDLEAPV VDIQILRSQK LLAKLQQPPD PPKVVLIPND YKNYVRTRHT 240 TDMQLGDARA ISEYLQRMKG ENPSFFCSIQ VDEDDQFRNV FWADVKSVMD FNYFGDVVCV 300 DTRYSISDYC RPLLLFIGVN HHKQPTIFGT AFIYDESVES FKWLFETFKS AMSGKQPRTV 360 LTDRSTAISD AVASAWPGTA HRFSLLHLYQ NATKVLSDTF QGSETFAHDF SRSLYDYEEG 420 DFLSSWEILL AKYNLKDNEW LSKLYEDRER WALPYGRDIF CADIAATLRS DNMDAILTGV 480 LKTEIDLPYF FSRYDKFLEE KRLAEQEADY LGVQMTQRVP PLRLLWQAAN TYTPALFELF 540 RLEFELVLAC MVYCCGEIGP ISEYEVTVKN RPQVHFVRFD SSEYMVLCSC KKFEFVGLPC 600 CHALKVLEIK NIKELPPQYI LKRWRKDAQS ESPKENFGFA AAGEDPKFTV SKRHNSLYRT 660 LYKVAAKAAE DIEGQRFMES QYDQLLEQVE LLLQAKLHDK PSLSTIMRSQ QPNLPQNDTS 720 NSEPRRASSK KNKNVENRRQ QQSPLESSKK KKGRQGLVEP EEAELPLRVL APTISNDIPN 780 HMSTPTNQFL APSHLMQAPY VTQQFGLNSL QGFSGMSPFG QMQEQSPVHL QQPHLQQPPF 840 HSGPQMHQAP PPDIQSLQFL SSNPQLGHQT TDQGQYTIPV WDFL

Sequence ? help Back to Top

Protein Sequence Length: 884 aa Download sequence

MRERRYLISI SRSDRADLPQ ADPPRLSHAK LWRKGVREVM EVDFWQATDR WPLERRSKRL  60
EKQNLQNEKK PESKEYEIVE AEQDPETEVV AGPGGEPKVG MVFLNEDKAY EFYVSYAGTA  120
GFNVRKGCSE KTANNVTKSR AYVCSKEGFR PKSFTAEPKK QRAETRTGCE AHMTVKITTS  180
GKYVVTECVA DHNHDLEAPV VDIQILRSQK LLAKLQQPPD PPKVVLIPND YKNYVRTRHT  240
TDMQLGDARA ISEYLQRMKG ENPSFFCSIQ VDEDDQFRNV FWADVKSVMD FNYFGDVVCV  300
DTRYSISDYC RPLLLFIGVN HHKQPTIFGT AFIYDESVES FKWLFETFKS AMSGKQPRTV  360
LTDRSTAISD AVASAWPGTA HRFSLLHLYQ NATKVLSDTF QGSETFAHDF SRSLYDYEEG  420
DFLSSWEILL AKYNLKDNEW LSKLYEDRER WALPYGRDIF CADIAATLRS DNMDAILTGV  480
LKTEIDLPYF FSRYDKFLEE KRLAEQEADY LGVQMTQRVP PLRLLWQAAN TYTPALFELF  540
RLEFELVLAC MVYCCGEIGP ISEYEVTVKN RPQVHFVRFD SSEYMVLCSC KKFEFVGLPC  600
CHALKVLEIK NIKELPPQYI LKRWRKDAQS ESPKENFGFA AAGEDPKFTV SKRHNSLYRT  660
LYKVAAKAAE DIEGQRFMES QYDQLLEQVE LLLQAKLHDK PSLSTIMRSQ QPNLPQNDTS  720
NSEPRRASSK KNKNVENRRQ QQSPLESSKK KKGRQGLVEP EEAELPLRVL APTISNDIPN  780
HMSTPTNQFL APSHLMQAPY VTQQFGLNSL QGFSGMSPFG QMQEQSPVHL QQPHLQQPPF  840
HSGPQMHQAP PPDIQSLQFL SSNPQLGHQT TDQGQYTIPV WDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.9