PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 985aa MW: 111290 Da PI: 6.0103

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.2	3.3e-24	212	298	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.6 212 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 298 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
STPVIEVENS VEKGVAIAGA ENGQAVPSTK NLGRGGDKKD VAEKDVESVI ELEEEHVEVE 60 DAAQDGAHDL GDGDDAGSDA GEGVMEKEVE VKEKRGRGRP RKAVTEGNAL QACVSTDLGV 120 TASQCAVDER KKILNKYLSK RQSRPASGRP AKPLERRSKR LEKQNLQNEK KPESKEYEIV 180 EAEQDPETEV VAGPGGEPKV GMVFLNEDKA YEFYVSYAGT AGFNVRKGCS EKTANNVTKS 240 RAYVCSKEGF RPKSFTAEPK KQRAETRTGC EAHMTVKITT SGKYVVTECV ADHNHDLEAP 300 VVDIQILRSQ KLLAKLQQPP DPPKVVLIPN DYKNYVRTRH TTDMQLGDAR AISEYLQRMK 360 GENPSFFCSI QVDEDDQFRN VFWADVKSVM DFNYFGDVVC VDTRYSISDY CRPLLLFIGV 420 NHHKQPTIFG TAFIYDESVE SFKWLFETFK SAMSGKQPRT VLTDRSTAIS DAVASAWPGT 480 AHRFSLLHLY QNATKVLSDT FQGSETFAHD FSRSLYDYEE GDFLSSWEIL LAKYNLKDNE 540 WLSKLYEDRE RWALPYGRDI FCADIAATLR SDNMDAILTG VLKTEIDLPY FFSRYDKFLE 600 EKRLAEQEAD YLGVQMTQRV PPLRLLWQAA NTYTPALFEL FRLEFELVLA CMVYCCGEIG 660 PISEYEVTVK NRPQVHFVRF DSSEYMVLCS CKKFEFVGLP CCHALKVLEI KNIKELPPQY 720 ILKRWRKDAQ SESPKENFGF AAAGEDPKFT VSKRHNSLYR TLYKVAAKAA EDIEGQRFME 780 SQYDQLLEQV ELLLQAKLHD KPSLSTIMRS QQPNLPQNDT SNSEPRRASS KKNKNVENRR 840 QQQSPLESSK KKKGRQGLVE PEEAELPLRV LAPTISNDIP NHMSTPTNQF LAPSHLMQAP 900 YVTQQFGLNS LQGFSGMSPF GQMQEQSPVH LQQPHLQQPP FHSGPQMHQA PPPDIQSLQF 960 LSSNPQLGHQ TTDQGQYTIP VWDFL

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

STPVIEVENS VEKGVAIAGA ENGQAVPSTK NLGRGGDKKD VAEKDVESVI ELEEEHVEVE  60
DAAQDGAHDL GDGDDAGSDA GEGVMEKEVE VKEKRGRGRP RKAVTEGNAL QACVSTDLGV  120
TASQCAVDER KKILNKYLSK RQSRPASGRP AKPLERRSKR LEKQNLQNEK KPESKEYEIV  180
EAEQDPETEV VAGPGGEPKV GMVFLNEDKA YEFYVSYAGT AGFNVRKGCS EKTANNVTKS  240
RAYVCSKEGF RPKSFTAEPK KQRAETRTGC EAHMTVKITT SGKYVVTECV ADHNHDLEAP  300
VVDIQILRSQ KLLAKLQQPP DPPKVVLIPN DYKNYVRTRH TTDMQLGDAR AISEYLQRMK  360
GENPSFFCSI QVDEDDQFRN VFWADVKSVM DFNYFGDVVC VDTRYSISDY CRPLLLFIGV  420
NHHKQPTIFG TAFIYDESVE SFKWLFETFK SAMSGKQPRT VLTDRSTAIS DAVASAWPGT  480
AHRFSLLHLY QNATKVLSDT FQGSETFAHD FSRSLYDYEE GDFLSSWEIL LAKYNLKDNE  540
WLSKLYEDRE RWALPYGRDI FCADIAATLR SDNMDAILTG VLKTEIDLPY FFSRYDKFLE  600
EKRLAEQEAD YLGVQMTQRV PPLRLLWQAA NTYTPALFEL FRLEFELVLA CMVYCCGEIG  660
PISEYEVTVK NRPQVHFVRF DSSEYMVLCS CKKFEFVGLP CCHALKVLEI KNIKELPPQY  720
ILKRWRKDAQ SESPKENFGF AAAGEDPKFT VSKRHNSLYR TLYKVAAKAA EDIEGQRFME  780
SQYDQLLEQV ELLLQAKLHD KPSLSTIMRS QQPNLPQNDT SNSEPRRASS KKNKNVENRR  840
QQQSPLESSK KKKGRQGLVE PEEAELPLRV LAPTISNDIP NHMSTPTNQF LAPSHLMQAP  900
YVTQQFGLNS LQGFSGMSPF GQMQEQSPVH LQQPHLQQPP FHSGPQMHQA PPPDIQSLQF  960
LSSNPQLGHQ TTDQGQYTIP VWDFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	102	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.6