PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 903aa MW: 102082 Da PI: 7.4505

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.3	2.9e-24	254	340	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.5 254 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 340 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
GKVEAPKKRG RKPGKKSTPV IEVENSVEKG VAIAGAENGQ AVPSTKNLGR GGDKKDVAEK 60 DVESVIELEE EHVEVEDAAQ DGAHDLGDGD DAGSDAGEGV MEKEVEVKEK RGRGRPRKAV 120 TEGNALQACV STDLGVTASQ CAVDERKKIL NKYLSKRQSR PASGRPAKIV SRQALAERRK 180 RGDGGRFLAS DGPLPLERRS KRLEKQNLQN EKKPESKEYE IVEAEQDPET EVVAGPGGEP 240 KVGMVFLNED KAYEFYVSYA GTAGFNVRKG CSEKTANNVT KSRAYVCSKE GFRPKSFTAE 300 PKKQRAETRT GCEAHMTVKI TTSGKYVVTE CVADHNHDLE APVVDIQILR SQKLLAKLQQ 360 PPDPPKVVLI PNDYKNYVRT RHTTDMQLGD ARAISEYLQR MKGENPSFFC SIQVDEDDQF 420 RNVFWADVKS VMDFNYFGDV VCVDTRYSIS DYCRPLLLFI GVNHHKQPTI FGTAFIYDES 480 VESFKWLFET FKSAMSGKQP RTVLTDRSTA ISDAVASAWP GTAHRFSLLH LYQNATKVLS 540 DTFQGSETFA HDFSRSLYDY EEGDFLSSWE ILLAKYNLKD NEWLSKLYED RERWALPYGR 600 DIFCADIAAT LRSDNMDAIL TGVLKTEIDL PYFFSRYDKF LEEKRLAEQE ADYLGVQMTQ 660 RVPPLRLLWQ AANTYTPALF ELFRLEFELV LACMVYCCGE IGPISEYEVT VKNRPQVHFV 720 RFDSSEYMVL CSCKKFEFVG LPCCHALKVL EIKNIKELPP QYILKRWRKD AQSESPKENF 780 GFAAAGEDPK FTVSKRHNSL YRTLYKVAAK AAEDIEGQRF MESQYDQLLE QVELLLQAKL 840 HDKPSLSTIM RSQQPNLPQN DTSNSEPRRA SSKKNKNVEN RRQQQSPLES SKKKKGRQGM 900 FIT

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

GKVEAPKKRG RKPGKKSTPV IEVENSVEKG VAIAGAENGQ AVPSTKNLGR GGDKKDVAEK  60
DVESVIELEE EHVEVEDAAQ DGAHDLGDGD DAGSDAGEGV MEKEVEVKEK RGRGRPRKAV  120
TEGNALQACV STDLGVTASQ CAVDERKKIL NKYLSKRQSR PASGRPAKIV SRQALAERRK  180
RGDGGRFLAS DGPLPLERRS KRLEKQNLQN EKKPESKEYE IVEAEQDPET EVVAGPGGEP  240
KVGMVFLNED KAYEFYVSYA GTAGFNVRKG CSEKTANNVT KSRAYVCSKE GFRPKSFTAE  300
PKKQRAETRT GCEAHMTVKI TTSGKYVVTE CVADHNHDLE APVVDIQILR SQKLLAKLQQ  360
PPDPPKVVLI PNDYKNYVRT RHTTDMQLGD ARAISEYLQR MKGENPSFFC SIQVDEDDQF  420
RNVFWADVKS VMDFNYFGDV VCVDTRYSIS DYCRPLLLFI GVNHHKQPTI FGTAFIYDES  480
VESFKWLFET FKSAMSGKQP RTVLTDRSTA ISDAVASAWP GTAHRFSLLH LYQNATKVLS  540
DTFQGSETFA HDFSRSLYDY EEGDFLSSWE ILLAKYNLKD NEWLSKLYED RERWALPYGR  600
DIFCADIAAT LRSDNMDAIL TGVLKTEIDL PYFFSRYDKF LEEKRLAEQE ADYLGVQMTQ  660
RVPPLRLLWQ AANTYTPALF ELFRLEFELV LACMVYCCGE IGPISEYEVT VKNRPQVHFV  720
RFDSSEYMVL CSCKKFEFVG LPCCHALKVL EIKNIKELPP QYILKRWRKD AQSESPKENF  780
GFAAAGEDPK FTVSKRHNSL YRTLYKVAAK AAEDIEGQRF MESQYDQLLE QVELLLQAKL  840
HDKPSLSTIM RSQQPNLPQN DTSNSEPRRA SSKKNKNVEN RRQQQSPLES SKKKKGRQGM  900
FIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	118	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.5