PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG063970.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 712aa MW: 81939 Da PI: 7.1074

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.8	2.1e-24	63	149	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.4 63 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 149 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
SWQPLERRSK RLEKQNLQNE KKPESKEYEI VEAEQDPETE VVAGPGGEPK VGMVFLNEDK 60 AYEFYVSYAG TAGFNVRKGC SEKTANNVTK SRAYVCSKEG FRPKSFTAEP KKQRAETRTG 120 CEAHMTVKIT TSGKYVVTEC VADHNHDLEA PVVDIQILRS QKLLAKLQQP PDPPKVVLIP 180 NDYKNYVRTR HTTDMQLGDA RAISEYLQRM KGENPSFFCS IQVDEDDQFR NVFWADVKSV 240 MDFNYFGDVV CVDTRYSISD YCRPLLLFIG VNHHKQPTIF GTAFIYDESV ESFKWLFETF 300 KSAMSGKQPR TVLTDRSTAI SDAVASAWPG TAHRFSLLHL YQNATKVLSD TFQGSETFAH 360 DFSRSLYDYE EGDFLSSWEI LLAKYNLKDN EWLSKLYEDR ERWALPYGRD IFCADIAATL 420 RSDNMDAILT GVLKTEIDLP YFFSRYDKFL EEKRLAEQEA DYLGVQMTQR VPPLRLLWQA 480 ANTYTPALFE LFRLEFELVL ACMVYCCGEI GPISEYEVTV KNRPQVHFVR FDSSEYMVLC 540 SCKKFEFVGL PCCHALKVLE IKNIKELPPQ YILKRWRKDA QSESPKENFG FAAAGEDPKF 600 TVSKRHNSLY RTLYKVAAKA AEDIEGQRFM ESQYDQLLEQ VELLLQAKLH DKPSLSTIMR 660 SQQPNLPQND TSNSEPRRAS SKKNKNVENR RQQQSPLESS KKKKGRQGMF IT

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

SWQPLERRSK RLEKQNLQNE KKPESKEYEI VEAEQDPETE VVAGPGGEPK VGMVFLNEDK  60
AYEFYVSYAG TAGFNVRKGC SEKTANNVTK SRAYVCSKEG FRPKSFTAEP KKQRAETRTG  120
CEAHMTVKIT TSGKYVVTEC VADHNHDLEA PVVDIQILRS QKLLAKLQQP PDPPKVVLIP  180
NDYKNYVRTR HTTDMQLGDA RAISEYLQRM KGENPSFFCS IQVDEDDQFR NVFWADVKSV  240
MDFNYFGDVV CVDTRYSISD YCRPLLLFIG VNHHKQPTIF GTAFIYDESV ESFKWLFETF  300
KSAMSGKQPR TVLTDRSTAI SDAVASAWPG TAHRFSLLHL YQNATKVLSD TFQGSETFAH  360
DFSRSLYDYE EGDFLSSWEI LLAKYNLKDN EWLSKLYEDR ERWALPYGRD IFCADIAATL  420
RSDNMDAILT GVLKTEIDLP YFFSRYDKFL EEKRLAEQEA DYLGVQMTQR VPPLRLLWQA  480
ANTYTPALFE LFRLEFELVL ACMVYCCGEI GPISEYEVTV KNRPQVHFVR FDSSEYMVLC  540
SCKKFEFVGL PCCHALKVLE IKNIKELPPQ YILKRWRKDA QSESPKENFG FAAAGEDPKF  600
TVSKRHNSLY RTLYKVAAKA AEDIEGQRFM ESQYDQLLEQ VELLLQAKLH DKPSLSTIMR  660
SQQPNLPQND TSNSEPRRAS SKKNKNVENR RQQQSPLESS KKKKGRQGMF IT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.4