PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063970.14

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 1182aa MW: 131486 Da PI: 6.5611

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.14	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.8	6e-07	112	158	2	49
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkte 49 fY Y++++GF+ r+ ++++s +g +++++f C + ++ ++ +k TRIDC5BG063970.14 112 FYYGYGERAGFKARTGSNRRSAGTGGMIMQRFLCCRGNYSYRKGNK-A 158 9*********************************998777666665.2 PP
2	FAR1	76.8	4.1e-24	436	522	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.14 436 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 522 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 1182 aa Download sequence
GPPASSSDPA PPAEPGDPLS LSRGYLSLRQ AGPASEEEAS PAPAGPPDER CRAMMEVVRK 60 DNGAGGEEGK WRVSKLVAEH NHGLGAAPTG EAASSAPELG MEFDSVHDAK GFYYGYGERA 120 GFKARTGSNR RSAGTGGMIM QRFLCCRGNY SYRKGNKAKD SDPAKEVEDG AAGGGGGEGK 180 VEAPKKRGRK PGKKSTPVIE VENSVEKGVA IAGAENGQAV PSTKNLGRGG DKKDVAEKDV 240 ESVIELEEEH VEVEDAAQDG AHDLGDGDDA GSDAGEGVME KEVEVKEKRG RGRPRKAVTE 300 GNALQACVST DLGVTASQCA VDERKKILNK YLSKRQSRPA SGRPAKIVSR QALAERRKRG 360 DGGRFLASDG PLSPQLPLER RSKRLEKQNL QNEKKPESKE YEIVEAEQDP ETEVVAGPGG 420 EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN VTKSRAYVCS KEGFRPKSFT 480 AEPKKQRAET RTGCEAHMTV KITTSGKYVV TECVADHNHD LEAPVVDIQI LRSQKLLAKL 540 QQPPDPPKVV LIPNDYKNYV RTRHTTDMQL GDARAISEYL QRMKGENPSF FCSIQVDEDD 600 QFRNVFWADV KSVMDFNYFG DVVCVDTRYS ISDYCRPLLL FIGVNHHKQP TIFGTAFIYD 660 ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA WPGTAHRFSL LHLYQNATKV 720 LSDTFQGSET FAHDFSRSLY DYEEGDFLSS WEILLAKYNL KDNEWLSKLY EDRERWALPY 780 GRDIFCADIA ATLRSDNMDA ILTGVLKTEI DLPYFFSRYD KFLEEKRLAE QEADYLGVQM 840 TQRVPPLRLL WQAANTYTPA LFELFRLEFE LVLACMVYCC GEIGPISEYE VTVKNRPQVH 900 FVRFDSSEYM VLCSCKKFEF VGLPCCHALK VLEIKNIKEL PPQYILKRWR KDAQSESPKE 960 NFGFAAAGED PKFTVSKRHN SLYRTLYKVA AKAAEDIEGQ RFMESQYDQL LEQVELLLQA 1020 KLHDKPSLST IMRSQQPNLP QNDTSNSEPR RASSKKNKNV ENRRQQQSPL ESSKKKKGRQ 1080 GLVEPEEAEL PLRVLAPTIS NDIPNHMSTP TNQFLAPSHL MQAPYVTQQF GLNSLQGFSG 1140 MSPFGQAPPP DIQSLQFLSS NPQLGHQTTD QGQYTIPVWD FL

Sequence ? help Back to Top

Protein Sequence Length: 1182 aa Download sequence

GPPASSSDPA PPAEPGDPLS LSRGYLSLRQ AGPASEEEAS PAPAGPPDER CRAMMEVVRK  60
DNGAGGEEGK WRVSKLVAEH NHGLGAAPTG EAASSAPELG MEFDSVHDAK GFYYGYGERA  120
GFKARTGSNR RSAGTGGMIM QRFLCCRGNY SYRKGNKAKD SDPAKEVEDG AAGGGGGEGK  180
VEAPKKRGRK PGKKSTPVIE VENSVEKGVA IAGAENGQAV PSTKNLGRGG DKKDVAEKDV  240
ESVIELEEEH VEVEDAAQDG AHDLGDGDDA GSDAGEGVME KEVEVKEKRG RGRPRKAVTE  300
GNALQACVST DLGVTASQCA VDERKKILNK YLSKRQSRPA SGRPAKIVSR QALAERRKRG  360
DGGRFLASDG PLSPQLPLER RSKRLEKQNL QNEKKPESKE YEIVEAEQDP ETEVVAGPGG  420
EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN VTKSRAYVCS KEGFRPKSFT  480
AEPKKQRAET RTGCEAHMTV KITTSGKYVV TECVADHNHD LEAPVVDIQI LRSQKLLAKL  540
QQPPDPPKVV LIPNDYKNYV RTRHTTDMQL GDARAISEYL QRMKGENPSF FCSIQVDEDD  600
QFRNVFWADV KSVMDFNYFG DVVCVDTRYS ISDYCRPLLL FIGVNHHKQP TIFGTAFIYD  660
ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA WPGTAHRFSL LHLYQNATKV  720
LSDTFQGSET FAHDFSRSLY DYEEGDFLSS WEILLAKYNL KDNEWLSKLY EDRERWALPY  780
GRDIFCADIA ATLRSDNMDA ILTGVLKTEI DLPYFFSRYD KFLEEKRLAE QEADYLGVQM  840
TQRVPPLRLL WQAANTYTPA LFELFRLEFE LVLACMVYCC GEIGPISEYE VTVKNRPQVH  900
FVRFDSSEYM VLCSCKKFEF VGLPCCHALK VLEIKNIKEL PPQYILKRWR KDAQSESPKE  960
NFGFAAAGED PKFTVSKRHN SLYRTLYKVA AKAAEDIEGQ RFMESQYDQL LEQVELLLQA  1020
KLHDKPSLST IMRSQQPNLP QNDTSNSEPR RASSKKNKNV ENRRQQQSPL ESSKKKKGRQ  1080
GLVEPEEAEL PLRVLAPTIS NDIPNHMSTP TNQFLAPSHL MQAPYVTQQF GLNSLQGFSG  1140
MSPFGQAPPP DIQSLQFLSS NPQLGHQTTD QGQYTIPVWD FL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	288	296	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-102	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.14