PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG063970.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 1203aa    MW: 134039 Da    PI: 6.6153
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG063970.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.86.1e-07105151249
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkte 49 
                        fY  Y++++GF+ r+ ++++s  +g +++++f C +  ++ ++ +k  
  TRIDC5BG063970.13 105 FYYGYGERAGFKARTGSNRRSAGTGGMIMQRFLCCRGNYSYRKGNK-A 151
                        9*********************************998777666665.2 PP
2FAR176.84.2e-24429515190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fY +YA ++GF+vrk  s+k+  n+ +++r +vCskeg+r ++ ++  + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l 
  TRIDC5BG063970.13 429 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 515
                        6*****************9999.66669*************999877..9999**********************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1203 aa     Download sequence    
DPAPPAEPGD PLSLSRGYLS LRQAGPASEE EASPAPAGPP DERCRAMMEV VRKDNGAGGE  60
EGKWRVSKLV AEHNHGLGAA PTGEAASSAP ELGMEFDSVH DAKGFYYGYG ERAGFKARTG  120
SNRRSAGTGG MIMQRFLCCR GNYSYRKGNK AKDSDPAKEV EDGAAGGGGG EGKVEAPKKR  180
GRKPGKKSTP VIEVENSVEK GVAIAGAENG QAVPSTKNLG RGGDKKDVAE KDVESVIELE  240
EEHVEVEDAA QDGAHDLGDG DDAGSDAGEG VMEKEVEVKE KRGRGRPRKA VTEGNALQAC  300
VSTDLGVTAS QCAVDERKKI LNKYLSKRQS RPASGRPAKI VSRQALAERR KRGDGGRFLA  360
SDGPLSPQLP LERRSKRLEK QNLQNEKKPE SKEYEIVEAE QDPETEVVAG PGGEPKVGMV  420
FLNEDKAYEF YVSYAGTAGF NVRKGCSEKT ANNVTKSRAY VCSKEGFRPK SFTAEPKKQR  480
AETRTGCEAH MTVKITTSGK YVVTECVADH NHDLEAPVVD IQILRSQKLL AKLQQPPDPP  540
KVVLIPNDYK NYVRTRHTTD MQLGDARAIS EYLQRMKGEN PSFFCSIQVD EDDQFRNVFW  600
ADVKSVMDFN YFGDVVCVDT RYSISDYCRP LLLFIGVNHH KQPTIFGTAF IYDESVESFK  660
WLFETFKSAM SGKQPRTVLT DRSTAISDAV ASAWPGTAHR FSLLHLYQNA TKVLSDTFQG  720
SETFAHDFSR SLYDYEEGDF LSSWEILLAK YNLKDNEWLS KLYEDRERWA LPYGRDIFCA  780
DIAATLRSDN MDAILTGVLK TEIDLPYFFS RYDKFLEEKR LAEQEADYLG VQMTQRVPPL  840
RLLWQAANTY TPALFELFRL EFELVLACMV YCCGEIGPIS EYEVTVKNRP QVHFVRFDSS  900
EYMVLCSCKK FEFVGLPCCH ALKVLEIKNI KELPPQYILK RWRKDAQSES PKENFGFAAA  960
GEDPKFTVSK RHNSLYRTLY KVAAKAAEDI EGQRFMESQY DQLLEQVELL LQAKLHDKPS  1020
LSTIMRSQQP NLPQNDTSNS EPRRASSKKN KNVENRRQQQ SPLESSKKKK GRQAVAGLVE  1080
PEEAELPLRV LAPTISNDIP NHMSTPTNQF LAPSHLMQAP YVTQQFGLNS LQGFSGMSPF  1140
GQEQSPVHLQ QPHLQQPPFH SGPQMHQAPP PDIQSLQFLS SNPQLGHQTT DQGQYTIPVW  1200
DFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1281289KRGRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-101FAR1 family protein