PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG063970.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 938aa MW: 105885 Da PI: 6.5685

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063970.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.3	3.1e-24	245	331	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ +++r +vCskeg+r ++ ++ + +++raetrtgC+a+++vk +++gk++vt+++ +HnH+l TRIDC5BG063970.10 245 EFYVSYAGTAGFNVRKGCSEKT-ANNVTKSRAYVCSKEGFRPKSFTA--EPKKQRAETRTGCEAHMTVKITTSGKYVVTECVADHNHDLE 331 6***************9999.66669*********999877..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 938 aa Download sequence
GRKPGKKSTP VIEVENSVEK GVAIAGAENG QAVPSTKNLG RGGDKKDVAE KDVESVIELE 60 EEHVEVEDAA QDGAHDLGDG DDAGSDAGEG VMEKEVEVKE KRGRGRPRKA VTEGNALQAC 120 VSTDLGVTAS QCAVDERKKI LNKYLSKRQS RPASGRPAKI VSRQALAERR KRGDGGRFLA 180 SDGPLPLERR SKRLEKQNLQ NEKKPESKEY EIVEAEQDPE TEVVAGPGGE PKVGMVFLNE 240 DKAYEFYVSY AGTAGFNVRK GCSEKTANNV TKSRAYVCSK EGFRPKSFTA EPKKQRAETR 300 TGCEAHMTVK ITTSGKYVVT ECVADHNHDL EAPVVDIQIL RSQKLLAKLQ QPPDPPKVVL 360 IPNDYKNYVR TRHTTDMQLG DARAISEYLQ RMKGENPSFF CSIQVDEDDQ FRNVFWADVK 420 SVMDFNYFGD VVCVDTRYSI SDYCRPLLLF IGVNHHKQPT IFGTAFIYDE SVESFKWLFE 480 TFKSAMSGKQ PRTVLTDRST AISDAVASAW PGTAHRFSLL HLYQNATKVL SDTFQGSETF 540 AHDFSRSLYD YEEGDFLSSW EILLAKYNLK DNEWLSKLYE DRERWALPYG RDIFCADIAA 600 TLRSDNMDAI LTGVLKTEID LPYFFSRYDK FLEEKRLAEQ EADYLGVQMT QRVPPLRLLW 660 QAANTYTPAL FELFRLEFEL VLACMVYCCG EIGPISEYEV TVKNRPQVHF VRFDSSEYMV 720 LCSCKKFEFV GLPCCHALKV LEIKNIKELP PQYILKRWRK DAQSESPKEN FGFAAAGEDP 780 KFTVSKRHNS LYRTLYKVAA KAAEDIEGQR FMESQYDQLL EQVELLLQAK LHDKPSLSTI 840 MRSQQPNLPQ NDTSNSEPRR ASSKKNKNVE NRRQQQSPLE SSKKKKGLVE PEEAELPLRV 900 LAPTISNDIP NHMSTPTNQF LAPSHLMQGT ICYTAIWS

Sequence ? help Back to Top

Protein Sequence Length: 938 aa Download sequence

GRKPGKKSTP VIEVENSVEK GVAIAGAENG QAVPSTKNLG RGGDKKDVAE KDVESVIELE  60
EEHVEVEDAA QDGAHDLGDG DDAGSDAGEG VMEKEVEVKE KRGRGRPRKA VTEGNALQAC  120
VSTDLGVTAS QCAVDERKKI LNKYLSKRQS RPASGRPAKI VSRQALAERR KRGDGGRFLA  180
SDGPLPLERR SKRLEKQNLQ NEKKPESKEY EIVEAEQDPE TEVVAGPGGE PKVGMVFLNE  240
DKAYEFYVSY AGTAGFNVRK GCSEKTANNV TKSRAYVCSK EGFRPKSFTA EPKKQRAETR  300
TGCEAHMTVK ITTSGKYVVT ECVADHNHDL EAPVVDIQIL RSQKLLAKLQ QPPDPPKVVL  360
IPNDYKNYVR TRHTTDMQLG DARAISEYLQ RMKGENPSFF CSIQVDEDDQ FRNVFWADVK  420
SVMDFNYFGD VVCVDTRYSI SDYCRPLLLF IGVNHHKQPT IFGTAFIYDE SVESFKWLFE  480
TFKSAMSGKQ PRTVLTDRST AISDAVASAW PGTAHRFSLL HLYQNATKVL SDTFQGSETF  540
AHDFSRSLYD YEEGDFLSSW EILLAKYNLK DNEWLSKLYE DRERWALPYG RDIFCADIAA  600
TLRSDNMDAI LTGVLKTEID LPYFFSRYDK FLEEKRLAEQ EADYLGVQMT QRVPPLRLLW  660
QAANTYTPAL FELFRLEFEL VLACMVYCCG EIGPISEYEV TVKNRPQVHF VRFDSSEYMV  720
LCSCKKFEFV GLPCCHALKV LEIKNIKELP PQYILKRWRK DAQSESPKEN FGFAAAGEDP  780
KFTVSKRHNS LYRTLYKVAA KAAEDIEGQR FMESQYDQLL EQVELLLQAK LHDKPSLSTI  840
MRSQQPNLPQ NDTSNSEPRR ASSKKNKNVE NRRQQQSPLE SSKKKKGLVE PEEAELPLRV  900
LAPTISNDIP NHMSTPTNQF LAPSHLMQGT ICYTAIWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	109	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063970.10