PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG063840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 339aa    MW: 38120.5 Da    PI: 6.5163
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG063840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1614.6e-50241562128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                        pG+rFhPtdeelv++yL++kv++k+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++
  TRIDC5BG063840.1  24 LPGYRFHPTDEELVTFYLRRKVARKPLRI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIY 115
                       69***************************.99***************445556889************************************* PP

               NAM  94 sk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       s+      +g  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  TRIDC5BG063840.1 116 SAgtggagSGVSIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 156
                       *98877776777***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEKAMSDGEV VLGSAGDEEE DVVLPGYRFH PTDEELVTFY LRRKVARKPL RIEVIREMDI  60
YKHDPWDLPK ASTVGGEKEW YFFCLRGRKY RNSIRPNRVT GSGFWKATGI DRPIYSAGTG  120
GAGSGVSIGL KKSLVYYRGS AGKGTKTDWM MHEFRLPPAA AAATNSSPSM QEAEVWTICR  180
IFRRTITYRK QQQPWRPAPA PSAADSNSNT GSFESSEAGD EYMNCLQAPS APCIPQQQQH  240
QQQYVSQVGT VDSVNFFYED TMHNQQFQGQ WSTAPAPPVP EQKLQSPLST AVSFHQNDHS  300
HAVAASDFYK VEGYLEEIAR MMEVTDPAGF YDYNYRSYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.19e-79NAC family protein