PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG063830.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 348aa MW: 38936.4 Da PI: 5.4587

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG063830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.8	5.2e-50	32	164	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pG+rFhPtdeelv++yL++kv+gk+l++ evi+e+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++ TRIDC5BG063830.1 32 LPGYRFHPTDEELVTFYLRRKVAGKSLSI-EVIREMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIY 123 69*************************.99***********445556889*********************************** PP NAM 94 sk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +g +glkk+Lv+y+g++ kg+ktdW+mhe+rl TRIDC5BG063830.1 124 SAgsgsasSGVSIGLKKSLVYYRGSTGKGTKTDWMMHEFRL 164 97766666666**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
SAMELEMEKA TRDGEVVLGG AEDDEGEEDV VLPGYRFHPT DEELVTFYLR RKVAGKSLSI 60 EVIREMDIYK HDPWDLPKAS TVGGEKEWYF FCLRGRKYRN SIRPNRVTGS GFWKATGIDR 120 PIYSAGSGSA SSGVSIGLKK SLVYYRGSTG KGTKTDWMMH EFRLPPAAAA ATNSSPSMQE 180 AEVWTICRIF RRAITYRKQQ QPWRPPPAPS AADSNSNTGS FESSEAGDEY MNCLQAPAPG 240 APCIPQQQHQ YVSQMDAVNG NNFFYRDTMH NQPFQGQWNA APAVPEPEEK PQDTLSTAVT 300 FHQNDHSHAV AANDFYKVEG YLEEIARMLE VTDPLEQSII RGSLKTYI

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

SAMELEMEKA TRDGEVVLGG AEDDEGEEDV VLPGYRFHPT DEELVTFYLR RKVAGKSLSI  60
EVIREMDIYK HDPWDLPKAS TVGGEKEWYF FCLRGRKYRN SIRPNRVTGS GFWKATGIDR  120
PIYSAGSGSA SSGVSIGLKK SLVYYRGSTG KGTKTDWMMH EFRLPPAAAA ATNSSPSMQE  180
AEVWTICRIF RRAITYRKQQ QPWRPPPAPS AADSNSNTGS FESSEAGDEY MNCLQAPAPG  240
APCIPQQQHQ YVSQMDAVNG NNFFYRDTMH NQPFQGQWNA APAVPEPEEK PQDTLSTAVT  300
FHQNDHSHAV AANDFYKVEG YLEEIARMLE VTDPLEQSII RGSLKTYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	5e-76	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG063830.1