PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG063600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 541aa MW: 60027.8 Da PI: 5.9174 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 426.4 | 2.3e-130 | 171 | 540 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 l++++++c +av+++d+ +++ l+++l +l+s +gdpmqRl ay++e+L arl+ s+s+lyk+l+++e + sse +++++l+ e++P++kf TRIDC5BG063600.1 171 LKQVIIACGKAVAANDMYATELLISELGQLVSVSGDPMQRLGAYMLEGLVARLSFSGSKLYKSLKCKEPT---SSELMSYMHLLCEICPFYKF 260 57899****************************************************************9...9******************* PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184 +++ aN aI ea++ge+ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiTg+++++s + l +g rL+++ +++g+pfefn+ v+ TRIDC5BG063600.1 261 GYMSANGAIAEAIKGENFVHIIDFQIAQGSQWITIIQALAARPGGPPFLRITGIDDSNSAyaRGGGLDMVGTRLHSVSASCGLPFEFNA-VHA 352 ********************************************************988899999************************.688 PP GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 + +++ +++L+++pgEa++Vn+++qlh+++desvs+e++rd++++++kslsP+vv++veqe+++n++ Fl r le+l+yy+a+f+s+++ lpr TRIDC5BG063600.1 353 ASHEVYIQHLDIRPGEAIVVNFAYQLHHTPDESVSMENHRDRIVRMIKSLSPRVVTLVEQESNTNTSAFLPRYLETLDYYTAMFESIDVALPR 445 999999*************************************************************************************** PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370 +++ ri+ E+++++r+ivn++acegaer+erhe ++kW++r+ +aGF+p+pls+ +++++k+ll ++s yr+ee++g l+lgWk+r Lv+ TRIDC5BG063600.1 446 DDKRRISTEQHCVARDIVNLIACEGAERVERHEVFGKWKARFAMAGFRPYPLSSVVNNTIKTLLDSYHSC-YRLEERDGVLYLGWKSRVLVVS 537 ********************************************************************55.********************** PP GRAS 371 SaW 373 SaW TRIDC5BG063600.1 538 SAW 540 *** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 541 aa Download sequence |
MSAKASERTY RCSDDSQMAY YNNSVPLAEN GRFYMMQNHL DVHYTSSGDG SQKISSNPQV 60 FEAQYCTLES SLADGVYPTQ SSTSSHSISP ISGSPLSQND SHSYHTYDSP PTASCVTEIP 120 DFQSKLKELE NAILGPELDI ASDSPESLLQ ANHPLKQDNW RQLLGINTGD LKQVIIACGK 180 AVAANDMYAT ELLISELGQL VSVSGDPMQR LGAYMLEGLV ARLSFSGSKL YKSLKCKEPT 240 SSELMSYMHL LCEICPFYKF GYMSANGAIA EAIKGENFVH IIDFQIAQGS QWITIIQALA 300 ARPGGPPFLR ITGIDDSNSA YARGGGLDMV GTRLHSVSAS CGLPFEFNAV HAASHEVYIQ 360 HLDIRPGEAI VVNFAYQLHH TPDESVSMEN HRDRIVRMIK SLSPRVVTLV EQESNTNTSA 420 FLPRYLETLD YYTAMFESID VALPRDDKRR ISTEQHCVAR DIVNLIACEG AERVERHEVF 480 GKWKARFAMA GFRPYPLSSV VNNTIKTLLD SYHSCYRLEE RDGVLYLGWK SRVLVVSSAW 540 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG063600.1 |