PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG061940.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 295aa MW: 31255.5 Da PI: 8.1424 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.5 | 6.6e-05 | 169 | 214 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + n+r r R +r+ +++ L++l+ + +K + a++L +A YI+ L TRIDC5BG061940.4 169 TSNKRPRARKERLGERILALQQLVSPF-----GKTDTASVLHEALGYIRFL 214 679***********************8.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MVKEEEVMAE AGGRGYLDML GLGEEAMADY FLCLSPSTSS HLSSAAVSTT TTSASTHAVA 60 SPTCASYLQP PPAAPCHQVL SFGGRAEQQY HGGDVFGFQY YYYGGAHAVP VAVPQKSSPT 120 TDCSSSISSM SSSPTATAAS AISTSKPQPA KKRGSRGSSD PRKAAPAATS NKRPRARKER 180 LGERILALQQ LVSPFGKTDT ASVLHEALGY IRFLHDQVQV LSSPYMQRLP PSSAPPAPLP 240 VSYPAPAKFY RGALCPVAVW LCVRDLTCGF MFMCDAQEEA VVEPGDLRSR GLCLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 8e-23 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG061940.4 |