PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG060710.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 544aa    MW: 60777 Da    PI: 5.2107
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG060710.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.52.8e-141190895
                      -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      s+++ ++ +++p  f  ++ ++  ++ +++l+ +sg++W v+l   k sg+  +++GWkeF ++n++  g ++vF+++g+s+f   v 
  TRIDC5BG060710.2 11 SYSFMEH-VTIPVGFH-KYLED--CTGMVSLRGPSGNKWPVEL--AKISGELRFARGWKEFLSDNRIGYGYMLVFRYEGQSQF--SVI 90
                      4555555.78888886.66444..7779***************..*********************************99999..444 PP
2B346.46.9e-15431522293
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +k+++++dv +s  +++p kf++++  +k es+++tl d++ + W+v + y+++ +    +++GW   + +n+L+  D++vF+l ++  + +l
  TRIDC5BG060710.2 431 IKAMKHNDVYASYFMIIPDKFVKTFL-PK-ESRKMTLWDPQAKPWKVWYEYTGGECPrAAFSAGWGALAMENNLEKWDVCVFELLDQeYNIKL 521
                       58999*****************8884.43.6789***************99555554599***********************8753244444 PP

                       E CS
                B3  93 v 93 
                       +
  TRIDC5BG060710.2 522 H 522
                       4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    
NCPHFFRALI SYSFMEHVTI PVGFHKYLED CTGMVSLRGP SGNKWPVELA KISGELRFAR  60
GWKEFLSDNR IGYGYMLVFR YEGQSQFSVI IFLPSSCEDP YASLAQPQRK DVDVAGEEEK  120
GLMSTNADGT APQEEDAHTG TSVDGTPQNE ASEEEDASED EEAEEVEDAL SETAENEEDG  180
ECHMCSDDAL EPAQQQQEDL RKTDDGFVVG KRARFRKVDD IMAEVDRSKK SKTVERKNSE  240
GPSGDLGSGG AASSDSLAEE SEHRPPKKSK AEEIRSASGD SPSKAAASSD NFAELDSRPS  300
KESKAEGKSF AGPLIVCTSS SSSSSKRVPL KKSSEETISS DNLAVHTGVF APESVCTDLT  360
MWHNSFGKRL SKQNQFPMFN KSNGENQPGR VLIKVMRRLG LTSQRRPVTQ REKECAMERA  420
QRFKSERPFA IKAMKHNDVY ASYFMIIPDK FVKTFLPKES RKMTLWDPQA KPWKVWYEYT  480
GGECPRAAFS AGWGALAMEN NLEKWDVCVF ELLDQEYNIK LHVHKVVMMI TPCILAPKPR  540
TNER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-13B3 family protein