PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG060710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 552aa    MW: 61713 Da    PI: 5.4846
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG060710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.42.9e-142099895
                      -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      s+++ ++ +++p  f  ++ ++  ++ +++l+ +sg++W v+l   k sg+  +++GWkeF ++n++  g ++vF+++g+s+f   v 
  TRIDC5BG060710.1 20 SYSFMEH-VTIPVGFH-KYLED--CTGMVSLRGPSGNKWPVEL--AKISGELRFARGWKEFLSDNRIGYGYMLVFRYEGQSQF--SVI 99
                      4555555.78888886.66444..7779***************..*********************************99999..444 PP
2B346.47e-15439530293
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +k+++++dv +s  +++p kf++++  +k es+++tl d++ + W+v + y+++ +    +++GW   + +n+L+  D++vF+l ++  + +l
  TRIDC5BG060710.1 439 IKAMKHNDVYASYFMIIPDKFVKTFL-PK-ESRKMTLWDPQAKPWKVWYEYTGGECPrAAFSAGWGALAMENNLEKWDVCVFELLDQeYNIKL 529
                       58999*****************8884.43.6789***************99555554599***********************8753244444 PP

                       E CS
                B3  93 v 93 
                       +
  TRIDC5BG060710.1 530 H 530
                       4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
HEKDQNGKKN CPHFFRALIS YSFMEHVTIP VGFHKYLEDC TGMVSLRGPS GNKWPVELAK  60
ISGELRFARG WKEFLSDNRI GYGYMLVFRY EGQSQFSVII FLPSSCEDPY ASLAQPQRKD  120
VDVAGEEEKG LMSTNADGTA PQEEDAHTGT SVDGTPQNEA SEEEDASEDE EAEEVEDALS  180
ETAENEEDGE CHMCSDDALE PAQQQQEDLR KTDDGFVVGK RARFRKVDDI MAEVDRSKKS  240
KTVERKNSEG PSGDLGSGGA ASSDSLAESE HRPPKKSKAE EIRSASGDSP SKAAASSDNF  300
AELDSRPSKE SKAEGKSFAG PLIVCTSSSS SSSKRVPLKK SSEETISSDN LAVHTGVFAP  360
ESVCTDLTMW HNSFGKRLSK QNQFPMFNKS NGENQPGRVL IKVMRRLGLT SQRRPVTQRE  420
KECAMERAQR FKSERPFAIK AMKHNDVYAS YFMIIPDKFV KTFLPKESRK MTLWDPQAKP  480
WKVWYEYTGG ECPRAAFSAG WGALAMENNL EKWDVCVFEL LDQEYNIKLH VHKVVMMITP  540
CILAPKPRTN ER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-13B3 family protein